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Related entries of code: 1af2
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1cttRCSB PDB    PDBbind294aa, >1CTT_1|Chain... at 100%
1ctuRCSB PDB    PDBbind294aa, >1CTU_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID1af2
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namecytidine deaminase
Ligand Name__U
EC.Number E.C.3.5.4.5
Resolution 2.3(Å)
Affinity (Kd/Ki/IC50)Ki=0.8mM
Release Year1997
Protein/NA SequenceCheck fasta file
Primary Reference Biochemistry v36 pp. 4768-74, 1997
Ligand Properties
Formula C9H12N2O6
Molecular Weight 244.201
Exact Mass 244.070
No. of atoms 29
No. of bonds 30
Polar Surface Area 124.78
LOGP Value -2.30      (Computed with XLOGP3)
-2.85      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0ABF6  
Entrez Gene IDNCBI Entrez Gene ID: 61754449  946663  
ASDInformation of known allosteric effects of PDB entries

 
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