Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 1c2t
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1c3eRCSB PDB    PDBbind209aa, >1C3E_1|Chains... at 100%
1garRCSB PDB    PDBbind212aa, >1GAR_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID1c2t
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameglycinamide ribonucleotide transformylase
Ligand NameNHS
EC.Number E.C.2.1.2.2
Resolution 2.1(Å)
Affinity (Kd/Ki/IC50)Ki=260nM
Release Year2000
Protein/NA SequenceCheck fasta file
Primary Reference Biochemistry v38 pp. 16783-93, 1999
Ligand Properties
Formula C23H22N4O8
Molecular Weight 482.443
Exact Mass 482.144
No. of atoms 57
No. of bonds 59
Polar Surface Area 212.77
LOGP Value 3.86      (Computed with XLOGP3)
1.94      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 8
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 12
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P08179  
Entrez Gene IDNCBI Entrez Gene ID: 946973  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2025    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com