Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 1c88
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1bzcRCSB PDB    PDBbind321aa, >1BZC_1|Chain... at 99%
1bzhRCSB PDB    PDBbind298aa, >1BZH_1|Chain... at 99%
1bzjRCSB PDB    PDBbind297aa, >1BZJ_1|Chain... at 100%
1c83RCSB PDB    PDBbind298aa, >1C83_1|Chain... at 99%
1c84RCSB PDB    PDBbind298aa, >1C84_1|Chain... at 99%
1c85RCSB PDB    PDBbind298aa, >1C85_1|Chain... at 99%
1c86RCSB PDB    PDBbind298aa, >1C86_1|Chain... at 98%
1c87RCSB PDB    PDBbind298aa, >1C87_1|Chain... at 99%
1ecvRCSB PDB    PDBbind298aa, >1ECV_1|Chain... at 99%
1g7fRCSB PDB    PDBbind298aa, >1G7F_1|Chain... at 99%
1g7gRCSB PDB    PDBbind298aa, >1G7G_1|Chain... at 100%
1gfyRCSB PDB    PDBbind298aa, >1GFY_1|Chain... at 97%
1kakRCSB PDB    PDBbind298aa, >1KAK_1|Chain... at 100%
1kavRCSB PDB    PDBbind298aa, >1KAV_1|Chain... at 100%
1l8gRCSB PDB    PDBbind321aa, >1L8G_1|Chain... at 99%
1lqfRCSB PDB    PDBbind295aa, >1LQF_1|Chains... at 95%
1nl9RCSB PDB    PDBbind321aa, >1NL9_1|Chain... at 99%
1nnyRCSB PDB    PDBbind321aa, >1NNY_1|Chain... at 99%
1no6RCSB PDB    PDBbind321aa, >1NO6_1|Chain... at 99%
1nwlRCSB PDB    PDBbind298aa, >1NWL_1|Chain... at 98%
1nz7RCSB PDB    PDBbind321aa, >1NZ7_1|Chain... at 99%
1onyRCSB PDB    PDBbind321aa, >1ONY_1|Chain... at 99%
1onzRCSB PDB    PDBbind321aa, >1ONZ_1|Chain... at 99%
1ph0RCSB PDB    PDBbind321aa, >1PH0_1|Chain... at 99%
1pxhRCSB PDB    PDBbind321aa, >1PXH_1|Chain... at 99%
1pynRCSB PDB    PDBbind321aa, >1PYN_1|Chain... at 99%
1q1mRCSB PDB    PDBbind321aa, >1Q1M_1|Chain... at 99%
1q6jRCSB PDB    PDBbind310aa, >1Q6J_1|Chain... at 96%
1q6mRCSB PDB    PDBbind310aa, >1Q6M_1|Chain... at 96%
1q6nRCSB PDB    PDBbind310aa, >1Q6N_1|Chains... at 96%
1q6pRCSB PDB    PDBbind310aa, >1Q6P_1|Chains... at 96%
1q6sRCSB PDB    PDBbind310aa, >1Q6S_1|Chains... at 96%
1q6tRCSB PDB    PDBbind310aa, >1Q6T_1|Chains... at 96%
1qxkRCSB PDB    PDBbind321aa, >1QXK_1|Chain... at 99%
1t48RCSB PDB    PDBbind298aa, >1T48_1|Chain... at 100%
1t49RCSB PDB    PDBbind298aa, >1T49_1|Chain... at 100%
1t4jRCSB PDB    PDBbind298aa, >1T4J_1|Chain... at 100%
1waxRCSB PDB    PDBbind321aa, >1WAX_1|Chain... at 99%
1xboRCSB PDB    PDBbind321aa, >1XBO_1|Chain... at 99%
2azrRCSB PDB    PDBbind299aa, >2AZR_1|Chain... at 100%
2b07RCSB PDB    PDBbind299aa, >2B07_1|Chain... at 100%
2bgdRCSB PDB    PDBbind321aa, >2BGD_1|Chain... at 99%
2bgeRCSB PDB    PDBbind321aa, >2BGE_1|Chain... at 99%
2cm7RCSB PDB    PDBbind321aa, >2CM7_1|Chain... at 99%
2cm8RCSB PDB    PDBbind321aa, >2CM8_1|Chain... at 99%
2cmaRCSB PDB    PDBbind327aa, >2CMA_1|Chain... at 97%
2cmbRCSB PDB    PDBbind304aa, >2CMB_1|Chain... at 97%
2cmcRCSB PDB    PDBbind304aa, >2CMC_1|Chain... at 97%
2cneRCSB PDB    PDBbind304aa, >2CNE_1|Chain... at 97%
2cnfRCSB PDB    PDBbind321aa, >2CNF_1|Chain... at 99%
2cngRCSB PDB    PDBbind321aa, >2CNG_1|Chain... at 99%
2cnhRCSB PDB    PDBbind321aa, >2CNH_1|Chain... at 99%
2cniRCSB PDB    PDBbind321aa, >2CNI_1|Chain... at 99%
2f6tRCSB PDB    PDBbind298aa, >2F6T_1|Chain... at 100%
2f6vRCSB PDB    PDBbind298aa, >2F6V_1|Chain... at 100%
2f6yRCSB PDB    PDBbind298aa, >2F6Y_1|Chain... at 100%
2f6zRCSB PDB    PDBbind298aa, >2F6Z_1|Chain... at 100%
2f70RCSB PDB    PDBbind298aa, >2F70_1|Chain... at 100%
2f71RCSB PDB    PDBbind298aa, >2F71_1|Chain... at 100%
2fjmRCSB PDB    PDBbind310aa, >2FJM_1|Chains... at 95%
2fjnRCSB PDB    PDBbind310aa, >2FJN_1|Chains... at 96%
2h4gRCSB PDB    PDBbind299aa, >2H4G_1|Chain... at 100%
2h4kRCSB PDB    PDBbind299aa, >2H4K_1|Chain... at 100%
2hb1RCSB PDB    PDBbind299aa, >2HB1_1|Chain... at 100%
2nt7RCSB PDB    PDBbind299aa, >2NT7_1|Chain... at 99%
2ntaRCSB PDB    PDBbind299aa, >2NTA_1|Chain... at 99%
2qbpRCSB PDB    PDBbind299aa, >2QBP_1|Chain... at 100%
2qbqRCSB PDB    PDBbind299aa, >2QBQ_1|Chain... at 100%
2qbrRCSB PDB    PDBbind299aa, >2QBR_1|Chain... at 100%
2qbsRCSB PDB    PDBbind299aa, >2QBS_1|Chain... at 100%
2veuRCSB PDB    PDBbind321aa, >2VEU_1|Chain... at 99%
2vevRCSB PDB    PDBbind321aa, >2VEV_1|Chain... at 99%
2vewRCSB PDB    PDBbind321aa, >2VEW_1|Chain... at 99%
2vexRCSB PDB    PDBbind321aa, >2VEX_1|Chain... at 99%
2veyRCSB PDB    PDBbind321aa, >2VEY_1|Chain... at 99%
2zmmRCSB PDB    PDBbind299aa, >2ZMM_1|Chain... at 100%
2zn7RCSB PDB    PDBbind299aa, >2ZN7_1|Chain... at 100%
3cweRCSB PDB    PDBbind290aa, >3CWE_1|Chain... at 97%
3eaxRCSB PDB    PDBbind321aa, >3EAX_1|Chain... at 99%
3eb1RCSB PDB    PDBbind321aa, >3EB1_1|Chain... at 99%
3zmpRCSB PDB    PDBbind329aa, >3ZMP_1|Chains... at 96%
3zmqRCSB PDB    PDBbind329aa, >3ZMQ_1|Chain... at 96%
4i8nRCSB PDB    PDBbind354aa, >4I8N_1|Chain... *
5k9wRCSB PDB    PDBbind306aa, >5K9W_1|Chain... at 98%
5ka1RCSB PDB    PDBbind289aa, >5KA1_1|Chain... at 98%
5ka3RCSB PDB    PDBbind306aa, >5KA3_1|Chain... at 98%
5ka7RCSB PDB    PDBbind306aa, >5KA7_1|Chain... at 98%
5ka9RCSB PDB    PDBbind306aa, >5KA9_1|Chain... at 98%
5kabRCSB PDB    PDBbind289aa, >5KAB_1|Chain... at 98%
5kadRCSB PDB    PDBbind306aa, >5KAD_1|Chains... at 98%
5t19RCSB PDB    PDBbind323aa, >5T19_1|Chain... at 99%
6b95RCSB PDB    PDBbind321aa, >6B95_1|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5k9wRCSB PDB    PDBbindOTA
5ka1RCSB PDB    PDBbindOTA
5ka3RCSB PDB    PDBbindOTA
5ka7RCSB PDB    PDBbindOTA
5ka9RCSB PDB    PDBbindOTA
5kabRCSB PDB    PDBbindOTA
5kadRCSB PDB    PDBbindOTA
Entry Information
PDB ID1c88
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Nametyrosine phosphatase 1b
Ligand NameOTA
EC.Number E.C.3.1.3.48
Resolution 1.8(Å)
Affinity (Kd/Ki/IC50)Ki=5.1uM
Release Year2000
Protein/NA SequenceCheck fasta file
Primary Reference J.Biol.Chem. v275 pp. 10300-7, 2000
Ligand Properties
Formula C10H11N2O5S
Molecular Weight 271.270
Exact Mass 271.039
No. of atoms 29
No. of bonds 30
Polar Surface Area 148.55
LOGP Value 0.04      (Computed with XLOGP3)
0.73      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P18031  
Entrez Gene IDNCBI Entrez Gene ID: 5770  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com