Browse entries in the PDBbind-CN Database

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Related entries of code: 1ceb
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1ceaRCSB PDB    PDBbind88aa, >1CEA_1|Chains... *
4cikRCSB PDB    PDBbind83aa, >4CIK_1|Chain... at 97%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1b2iRCSB PDB    PDBbindAMH
6nmbRCSB PDB    PDBbindAMH

Entry Information
PDB ID1ceb
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Nameplasminogen
Ligand NameAMH
EC.Number E.C.3.4.21.7
Resolution 2.1(Å)
Affinity (Kd/Ki/IC50)Kd=1uM
Release Year1996
Protein/NA SequenceCheck fasta file
Primary Reference Biochemistry v35 pp. 2567-76, 1996
Ligand Properties
Formula C8H16NO2
Molecular Weight 158.218
Exact Mass 158.118
No. of atoms 27
No. of bonds 27
Polar Surface Area 64.94
LOGP Value -0.80      (Computed with XLOGP3)
0.12      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 1
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P00747  
Entrez Gene IDNCBI Entrez Gene ID: 5340  
ASDInformation of known allosteric effects of PDB entries

 
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