Browse entries in the PDBbind-CN Database

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Related entries of code: 1dmb
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1anfRCSB PDB    PDBbind370aa, >1ANF_1|Chain... at 97%
1ez9RCSB PDB    PDBbind370aa, >1EZ9_1|Chains... at 97%
1n3wRCSB PDB    PDBbind366aa, >1N3W_1|Chain... at 96%
3mbpRCSB PDB    PDBbind370aa, >3MBP_1|Chain... at 97%
3rumRCSB PDB    PDBbind378aa, >3RUM_1|Chain... at 96%
3vfjRCSB PDB    PDBbind378aa, >3VFJ_1|Chain... at 96%
4mbpRCSB PDB    PDBbind370aa, >4MBP_1|Chain... at 97%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2y4sRCSB PDB    PDBbindBCD
2zynRCSB PDB    PDBbindBCD
3ck8RCSB PDB    PDBbindBCD
3m3rRCSB PDB    PDBbindBCD
5mk9RCSB PDB    PDBbindBCD
Entry Information
PDB ID1dmb
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namemaltodextrin binding protein
Ligand NameBCD
EC.Number E.C.-.-.-.-
Resolution 1.8(Å)
Affinity (Kd/Ki/IC50)Kd=1.80uM
Release Year1993
Protein/NA SequenceCheck fasta file
Primary Reference Biochemistry v32 pp. 10553-9, 1993
Ligand Properties
Formula C42H70O35
Molecular Weight 1134.980
Exact Mass 1134.370
No. of atoms 147
No. of bonds 154
Polar Surface Area 554.05
LOGP Value -15.02      (Computed with XLOGP3)
-15.23      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 21
No. of Hydrogen Bond Acceptors: 21
No. of Rotatable Bonds: 28
No. of Nitrogen and Oxygen Atoms: 35
No. of Rings: 8
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0AEX9  
Entrez Gene IDNCBI Entrez Gene ID: 61753691  948538  
ASDInformation of known allosteric effects of PDB entries
 
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