Browse entries in the PDBbind-CN Database

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Related entries of code: 1jd0
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4ht2RCSB PDB    PDBbind263aa, >4HT2_1|Chains... at 99%
4kp5RCSB PDB    PDBbind263aa, >4KP5_1|Chains... at 99%
4kp8RCSB PDB    PDBbind263aa, >4KP8_1|Chains... at 99%
4q0lRCSB PDB    PDBbind263aa, >4Q0L_1|Chains... at 99%
4qj0RCSB PDB    PDBbind263aa, >4QJ0_1|Chains... at 99%
4qjoRCSB PDB    PDBbind263aa, >4QJO_1|Chains... at 99%
4qjwRCSB PDB    PDBbind263aa, >4QJW_1|Chains... at 99%
4ww8RCSB PDB    PDBbind263aa, >4WW8_1|Chains... at 99%
5ll5RCSB PDB    PDBbind263aa, >5LL5_1|Chains... at 99%
5ll9RCSB PDB    PDBbind263aa, >5LL9_1|Chains... at 99%
5lloRCSB PDB    PDBbind263aa, >5LLO_1|Chains... at 99%
5llpRCSB PDB    PDBbind263aa, >5LLP_1|Chains... at 99%
5msbRCSB PDB    PDBbind263aa, >5MSB_1|Chains... at 99%
6g7aRCSB PDB    PDBbind263aa, >6G7A_1|Chains... at 99%
6g5lRCSB PDB    PDBbind263aa, >6G5L_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1azmRCSB PDB    PDBbindAZM
1ydaRCSB PDB    PDBbindAZM
1ydbRCSB PDB    PDBbindAZM
1yddRCSB PDB    PDBbindAZM
1zsbRCSB PDB    PDBbindAZM
2h4nRCSB PDB    PDBbindAZM
2uy4RCSB PDB    PDBbindAZM
2xtkRCSB PDB    PDBbindAZM
3czvRCSB PDB    PDBbindAZM
3dc3RCSB PDB    PDBbindAZM
3hs4RCSB PDB    PDBbindAZM
3ml5RCSB PDB    PDBbindAZM
3ucjRCSB PDB    PDBbindAZM
4g0cRCSB PDB    PDBbindAZM
4ygfRCSB PDB    PDBbindAZM
5jn8RCSB PDB    PDBbindAZM
Entry Information
PDB ID1jd0
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameextracellular domain of human zinc enzyme carbonic anhydrase XII
Ligand NameAZM
EC.Number E.C.4.2.1.1
Resolution 1.5(Å)
Affinity (Kd/Ki/IC50)Ki=5.7nM
Release Year2001
Protein/NA SequenceCheck fasta file
Primary Reference (2009) Bioorg. Med. Chem., Vol.17, pp.1214-1221
Ligand Properties
Formula C4H6N4O3S2
Molecular Weight 222.245
Exact Mass 221.988
No. of atoms 19
No. of bonds 19
Polar Surface Area 151.66
LOGP Value -1.23      (Computed with XLOGP3)
1.00      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): O43570  
Entrez Gene IDNCBI Entrez Gene ID: 771  
ASDInformation of known allosteric effects of PDB entries
 
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