Browse entries in the PDBbind-CN Database

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Related entries of code: 1k27
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
6dz3RCSB PDB    PDBbind297aa, >6DZ3_1|Chains... at 100%
6dz2RCSB PDB    PDBbind297aa, >6DZ2_1|Chains... at 100%
6dz0RCSB PDB    PDBbind297aa, >6DZ0_1|Chain... at 100%
6dyzRCSB PDB    PDBbind297aa, >6DYZ_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1y6rRCSB PDB    PDBbindMTM

Entry Information
PDB ID1k27
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Name5'-deoxy-5'-methylthioadenosine phosphorylase
Ligand NameMTM
EC.Number E.C.2.4.2.28
Resolution 1.95(Å)
Affinity (Kd/Ki/IC50)Ki=1.0nM
Release Year2003
Protein/NA SequenceCheck fasta file
Primary Reference Biochemistry v43 pp. 9-18, 2004
Ligand Properties
Formula C12H18N5O2S
Molecular Weight 296.369
Exact Mass 296.118
No. of atoms 38
No. of bonds 40
Polar Surface Area 149.96
LOGP Value -1.27      (Computed with XLOGP3)
0.76      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q13126  
Entrez Gene IDNCBI Entrez Gene ID: 4507  
ASDInformation of known allosteric effects of PDB entries

 
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