Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 1qf4
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1ch8RCSB PDB    PDBbind431aa, >1CH8_1|Chain... *
1juyRCSB PDB    PDBbind431aa, >1JUY_1|Chain... at 100%
1qf5RCSB PDB    PDBbind431aa, >1QF5_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID1qf4
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameadenylosuccinate synthetase
Ligand NameRPD
EC.Number E.C.6.3.4.4
Resolution 2.2(Å)
Affinity (Kd/Ki/IC50)IC50=0.665uM
Release Year1999
Protein/NA SequenceCheck fasta file
Primary Reference Angew.Chem. v38 pp. 3159-3162, 1999
Ligand Properties
Formula C13H24N3O13P
Molecular Weight 461.316
Exact Mass 461.105
No. of atoms 54
No. of bonds 55
Polar Surface Area 264.81
LOGP Value -6.49      (Computed with XLOGP3)
-5.25      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 6
No. of Hydrogen Bond Acceptors: 11
No. of Rotatable Bonds: 12
No. of Nitrogen and Oxygen Atoms: 16
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0A7D4  
Entrez Gene IDNCBI Entrez Gene ID: 61753831  948695  
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com