Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 1qi0
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1e5jRCSB PDB    PDBbind305aa, >1E5J_1|Chain... *
1h5vRCSB PDB    PDBbind304aa, >1H5V_1|Chain... at 99%
1ocqRCSB PDB    PDBbind303aa, >1OCQ_1|Chain... at 100%
1w3kRCSB PDB    PDBbind303aa, >1W3K_1|Chain... at 100%
1w3lRCSB PDB    PDBbind303aa, >1W3L_1|Chain... at 100%
5a3hRCSB PDB    PDBbind303aa, >5A3H_1|Chain... at 100%
8a3hRCSB PDB    PDBbind303aa, >8A3H_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1z3tRCSB PDB    PDBbindCBI
2b1rRCSB PDB    PDBbindCBI
2rfyRCSB PDB    PDBbindCBI
Entry Information
PDB ID1qi0
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nameendoglucanase 5a
Ligand NameCBI
EC.Number E.C.3.2.1.4
Resolution 2.1(Å)
Affinity (Kd/Ki/IC50)Ki=4.5mM
Release Year2000
Protein/NA SequenceCheck fasta file
Primary Reference J.Mol.Biol. v297 pp. 819-28, 2000
Ligand Properties
Formula C12H22O11
Molecular Weight 342.296
Exact Mass 342.116
No. of atoms 45
No. of bonds 46
Polar Surface Area 189.53
LOGP Value -4.73      (Computed with XLOGP3)
-5.40      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 8
No. of Hydrogen Bond Acceptors: 8
No. of Rotatable Bonds: 12
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): O85465  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com