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Related entries of code: 1vyq
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2y8cRCSB PDB    PDBbind173aa, >2Y8C_1|Chains... at 100%
3t60RCSB PDB    PDBbind181aa, >3T60_1|Chains... *
3t64RCSB PDB    PDBbind181aa, >3T64_1|Chains... at 98%
3t6yRCSB PDB    PDBbind181aa, >3T6Y_1|Chains... at 98%
3t70RCSB PDB    PDBbind181aa, >3T70_1|Chains... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID1vyq
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namedeoxyuridine 5'-triphosphate nucleotidohydrolase
Ligand NameDUX
EC.Number E.C.3.6.1.23
Resolution 2.4(Å)
Affinity (Kd/Ki/IC50)Ki=4.98uM
Release Year2005
Protein/NA SequenceCheck fasta file
Primary Reference Structurev13;pp.329
Ligand Properties
Formula C28H25FN2O4
Molecular Weight 472.508
Exact Mass 472.180
No. of atoms 60
No. of bonds 64
Polar Surface Area 73.32
LOGP Value 4.36      (Computed with XLOGP3)
4.17      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q8II92  
Entrez Gene IDNCBI Entrez Gene ID: 810829  
ASDInformation of known allosteric effects of PDB entries
 
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