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Related entries of code: 1xd0
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1u2yRCSB PDB    PDBbind496aa, >1U2Y_1|Chain... *
1u33RCSB PDB    PDBbind496aa, >1U33_1|Chain... at 100%
3oldRCSB PDB    PDBbind496aa, >3OLD_1|Chain... at 99%
3oleRCSB PDB    PDBbind496aa, >3OLE_1|Chain... at 99%
3olgRCSB PDB    PDBbind496aa, >3OLG_1|Chain... at 99%
3oliRCSB PDB    PDBbind496aa, >3OLI_1|Chain... at 99%
4gqqRCSB PDB    PDBbind496aa, >4GQQ_1|Chain... at 100%
4gqrRCSB PDB    PDBbind496aa, >4GQR_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID1xd0
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Namealpha-amylase
Ligand NameARE
EC.Number E.C.3.2.1.1
Resolution 2(Å)
Affinity (Kd/Ki/IC50)Ki=0.075uM
Release Year2004
Protein/NA SequenceCheck fasta file
Primary Reference Biochemistry v44 pp. 3347-57, 2005
Ligand Properties
Formula C31H56NO23
Molecular Weight 810.769
Exact Mass 810.324
No. of atoms 111
No. of bonds 115
Polar Surface Area 404.9
LOGP Value -9.80      (Computed with XLOGP3)
-11.69      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 17
No. of Hydrogen Bond Acceptors: 16
No. of Rotatable Bonds: 28
No. of Nitrogen and Oxygen Atoms: 24
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P04746  
Entrez Gene IDNCBI Entrez Gene ID: 279  
ASDInformation of known allosteric effects of PDB entries

 
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