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Related entries of code: 1yhm
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4dwbRCSB PDB    PDBbind362aa, >4DWB_1|Chain... at 100%
4dwgRCSB PDB    PDBbind362aa, >4DWG_1|Chain... at 100%
4dxjRCSB PDB    PDBbind362aa, >4DXJ_1|Chains... at 100%
4dzwRCSB PDB    PDBbind362aa, >4DZW_1|Chain... at 100%
4e1eRCSB PDB    PDBbind361aa, >4E1E_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID1yhm
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namefarnesyl pyrophosphate synthase
Ligand NameAHD
EC.Number E.C.2.5.1.10
Resolution 2.5(Å)
Affinity (Kd/Ki/IC50)IC50=147uM
Release Year2005
Protein/NA SequenceCheck fasta file
Primary Reference Proteins v62 pp. 80-8, 2006
Ligand Properties
Formula C4H14NO7P2
Molecular Weight 250.104
Exact Mass 250.025
No. of atoms 28
No. of bonds 27
Polar Surface Area 182.55
LOGP Value -6.86      (Computed with XLOGP3)
-1.99      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q8WS26  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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