Browse entries in the PDBbind-CN Database

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Related entries of code: 2ai8
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1bskRCSB PDB    PDBbind168aa, >1BSK_1|Chain... *
1g27RCSB PDB    PDBbind168aa, >1G27_1|Chains... at 100%
1g2aRCSB PDB    PDBbind168aa, >1G2A_1|Chains... at 100%
1icjRCSB PDB    PDBbind168aa, >1ICJ_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2ai7RCSB PDB    PDBbindSB7

Entry Information
PDB ID2ai8
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namepeptide deformylase
Ligand NameSB7
EC.Number E.C.3.5.1.88
Resolution 1.7(Å)
Affinity (Kd/Ki/IC50)IC50=0.16uM
Release Year2005
Protein/NA SequenceCheck fasta file
Primary Reference Protein Sci. v12 pp. 349-60, 2003
Ligand Properties
Formula C10H16NO2
Molecular Weight 182.240
Exact Mass 182.118
No. of atoms 29
No. of bonds 29
Polar Surface Area 44.9
LOGP Value 1.50      (Computed with XLOGP3)
-0.16      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0A6K3  
Entrez Gene IDNCBI Entrez Gene ID: 61756399  947780  
ASDInformation of known allosteric effects of PDB entries

 
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