Browse entries in the PDBbind-CN Database

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Related entries of code: 2f0z
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1vcuRCSB PDB    PDBbind382aa, >1VCU_1|Chains... *
2f10RCSB PDB    PDBbind382aa, >2F10_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1a4gRCSB PDB    PDBbindZMR
2ya7RCSB PDB    PDBbindZMR
3ckzRCSB PDB    PDBbindZMR
3ti5RCSB PDB    PDBbindZMR
3ticRCSB PDB    PDBbindZMR
4b7nRCSB PDB    PDBbindZMR
4b7qRCSB PDB    PDBbindZMR
4cpzRCSB PDB    PDBbindZMR
4mwrRCSB PDB    PDBbindZMR
4mwxRCSB PDB    PDBbindZMR
5l17RCSB PDB    PDBbindZMR
6ekuRCSB PDB    PDBbindZMR

Entry Information
PDB ID2f0z
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameHuman Sialidase Neu2
Ligand NameZMR
EC.Number E.C.3.2.1.18
Resolution 2.8(Å)
Affinity (Kd/Ki/IC50)Ki=0.017mM
Release Year2006
Protein/NA SequenceCheck fasta file
Primary Reference (2010) J. Med. Chem., Vol.53, pp.2998-3002
Ligand Properties
Formula C12H23N4O7
Molecular Weight 335.334
Exact Mass 335.157
No. of atoms 46
No. of bonds 46
Polar Surface Area 202.33
LOGP Value -0.61      (Computed with XLOGP3)
-4.04      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9Y3R4  
Entrez Gene IDNCBI Entrez Gene ID: 4759  
ASDInformation of known allosteric effects of PDB entries

 
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