Browse entries in the PDBbind-CN Database

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Related entries of code: 2frd
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1nm5RCSB PDB    PDBbind203aa, >1NM5_2|Chain... *
2fr8RCSB PDB    PDBbind203aa, >2FR8_2|Chain... at 100%
2fsvRCSB PDB    PDBbind203aa, >2FSV_2|Chain... at 99%
2oorRCSB PDB    PDBbind174aa, >2OOR_2|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2fr8RCSB PDB    PDBbindNAD
2fsvRCSB PDB    PDBbindNAD
2zitRCSB PDB    PDBbindNAD
3b78RCSB PDB    PDBbindNAD
3b82RCSB PDB    PDBbindNAD
3b8hRCSB PDB    PDBbindNAD
Entry Information
PDB ID2frd
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Name(dI.S138A.)2(dIII)1 complex
Ligand NameNAD
EC.Number E.C.1.6.1.2
Resolution 3.2(Å)
Affinity (Kd/Ki/IC50)Kd=29uM
Release Year2006
Protein/NA SequenceCheck fasta file
Primary Reference The Journal of biological chemistry. (2006) 281, pp. 13345-54
Ligand Properties
Formula C21H30N7O14P2
Molecular Weight 666.449
Exact Mass 666.133
No. of atoms 74
No. of bonds 78
Polar Surface Area 351.76
LOGP Value -6.12      (Computed with XLOGP3)
-2.61      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 6
No. of Hydrogen Bond Acceptors: 12
No. of Rotatable Bonds: 15
No. of Nitrogen and Oxygen Atoms: 21
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0C188  Q2RSB2  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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