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Related entries of code: 2g79
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2cbsRCSB PDB    PDBbind137aa, >2CBS_1|Chain... at 100%
2fr3RCSB PDB    PDBbind137aa, >2FR3_1|Chain... at 100%
2g78RCSB PDB    PDBbind137aa, >2G78_1|Chain... at 98%
3cbsRCSB PDB    PDBbind137aa, >3CBS_1|Chain... at 100%
3cwkRCSB PDB    PDBbind137aa, >3CWK_1|Chain... at 96%
4i9rRCSB PDB    PDBbind137aa, >4I9R_1|Chain... at 95%
4i9sRCSB PDB    PDBbind137aa, >4I9S_1|Chain... at 96%
5ogbRCSB PDB    PDBbind138aa, >5OGB_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3hx3RCSB PDB    PDBbindRET
3hy5RCSB PDB    PDBbindRET
4cizRCSB PDB    PDBbindRET
4edeRCSB PDB    PDBbindRET
4eejRCSB PDB    PDBbindRET
4efgRCSB PDB    PDBbindRET
4exzRCSB PDB    PDBbindRET
4gkcRCSB PDB    PDBbindRET
4i9rRCSB PDB    PDBbindRET
4i9sRCSB PDB    PDBbindRET
4ruuRCSB PDB    PDBbindRET
6e7mRCSB PDB    PDBbindRET
6e5sRCSB PDB    PDBbindRET
Entry Information
PDB ID2g79
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameCellular retinoic acid-binding protein 2
Ligand NameRET
EC.Number E.C.-.-.-.-
Resolution 1.69(Å)
Affinity (Kd/Ki/IC50)Kd=120nM
Release Year2007
Protein/NA SequenceCheck fasta file
Primary Reference J. Am. Chem. Soc. 2007, 129, 6142-6148.
Ligand Properties
Formula C20H28O
Molecular Weight 284.436
Exact Mass 284.214
No. of atoms 49
No. of bonds 49
Polar Surface Area 17.07
LOGP Value 5.87      (Computed with XLOGP3)
5.72      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 1
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P29373  
Entrez Gene IDNCBI Entrez Gene ID: 1382  
ASDInformation of known allosteric effects of PDB entries
 
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