Browse entries in the PDBbind-CN Database

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Related entries of code: 2gh6
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1zz1RCSB PDB    PDBbind369aa, >1ZZ1_1|Chains... at 99%
1zz3RCSB PDB    PDBbind369aa, >1ZZ3_1|Chains... at 99%
2vcgRCSB PDB    PDBbind375aa, >2VCG_1|Chains... *
5g17RCSB PDB    PDBbind369aa, >5G17_1|Chains... at 99%
5g1aRCSB PDB    PDBbind371aa, >5G1A_1|Chains... at 100%
5g1cRCSB PDB    PDBbind370aa, >5G1C_1|Chains... at 100%
5g3wRCSB PDB    PDBbind374aa, >5G3W_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID2gh6
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namehistone deacetylase-like amidohydrolase FB188
Ligand NameCF3
EC.Number E.C.3.5.1.-
Resolution 2.2(Å)
Affinity (Kd/Ki/IC50)IC50=11.19uM
Release Year2007
Protein/NA SequenceCheck fasta file
Primary Reference (2007) Acta Crystallogr.,Sect.F Vol. 63: pp. 270-273
Ligand Properties
Formula C15H18F3NO2
Molecular Weight 301.304
Exact Mass 301.129
No. of atoms 39
No. of bonds 39
Polar Surface Area 46.17
LOGP Value 3.60      (Computed with XLOGP3)
4.17      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q70I53  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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