Browse entries in the PDBbind-CN Database

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Related entries of code: 2ogy
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2e7fRCSB PDB    PDBbind262aa, >2E7F_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2e7fRCSB PDB    PDBbindC2F
2idkRCSB PDB    PDBbindC2F
Entry Information
PDB ID2ogy
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein Name5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase
Ligand NameC2F
EC.Number E.C.-.-.-.-
Resolution 2.3(Å)
Affinity (Kd/Ki/IC50)Kd=33.2uM
Release Year2007
Protein/NA SequenceCheck fasta file
Primary Reference J.Biol.Chem. 282: 6609-6618
Ligand Properties
Formula C20H25N7O6
Molecular Weight 459.456
Exact Mass 459.187
No. of atoms 58
No. of bonds 60
Polar Surface Area 202.77
LOGP Value 1.84      (Computed with XLOGP3)
0.99      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 13
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q46389  
Entrez Gene IDNCBI Entrez Gene ID: 61289915  
ASDInformation of known allosteric effects of PDB entries
 
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