Browse entries in the PDBbind-CN Database

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Related entries of code: 2ov4
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1m83RCSB PDB    PDBbind328aa, >1M83_1|Chain... at 100%
1mauRCSB PDB    PDBbind328aa, >1MAU_1|Chain... at 100%
1mawRCSB PDB    PDBbind328aa, >1MAW_1|Chains... at 100%
5dk4RCSB PDB    PDBbind329aa, >5DK4_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID2ov4
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameTryptophanyl-tRNA synthetase
Ligand NameAQP
EC.Number E.C.6.1.1.2
Resolution 2.5(Å)
Affinity (Kd/Ki/IC50)Kd=18uM
Release Year2007
Protein/NA SequenceCheck fasta file
Primary Reference J.Mol.Biol. 369: 108-128
Ligand Properties
Formula C10H21N5O16P4
Molecular Weight 591.193
Exact Mass 590.993
No. of atoms 56
No. of bonds 58
Polar Surface Area 392.66
LOGP Value -7.24      (Computed with XLOGP3)
-2.68      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 14
No. of Rotatable Bonds: 11
No. of Nitrogen and Oxygen Atoms: 21
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P00953  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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