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Related entries of code: 2p8n
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1br5RCSB PDB    PDBbind267aa, >1BR5_1|Chain... at 100%
1br6RCSB PDB    PDBbind268aa, >1BR6_1|Chain... at 99%
1il3RCSB PDB    PDBbind267aa, >1IL3_1|Chain... at 100%
1il4RCSB PDB    PDBbind267aa, >1IL4_1|Chain... at 100%
1il5RCSB PDB    PDBbind267aa, >1IL5_1|Chains... at 100%
1il9RCSB PDB    PDBbind267aa, >1IL9_1|Chain... at 100%
3ej5RCSB PDB    PDBbind257aa, >3EJ5_1|Chain... at 99%
3hioRCSB PDB    PDBbind268aa, >3HIO_1|Chain... at 99%
3px8RCSB PDB    PDBbind258aa, >3PX8_1|Chain... at 100%
3px9RCSB PDB    PDBbind258aa, >3PX9_1|Chain... at 100%
4esiRCSB PDB    PDBbind267aa, >4ESI_1|Chain... at 100%
4huoRCSB PDB    PDBbind267aa, >4HUO_1|Chain... at 100%
4hupRCSB PDB    PDBbind267aa, >4HUP_1|Chain... at 100%
4hv3RCSB PDB    PDBbind268aa, >4HV3_1|Chain... at 99%
4hv7RCSB PDB    PDBbind267aa, >4HV7_1|Chain... at 100%
4mx1RCSB PDB    PDBbind268aa, >4MX1_1|Chain... at 99%
4mx5RCSB PDB    PDBbind268aa, >4MX5_1|Chain... at 99%
5gu4RCSB PDB    PDBbind301aa, >5GU4_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1jysRCSB PDB    PDBbindADE
1nliRCSB PDB    PDBbindADE
2pqjRCSB PDB    PDBbindADE
3kpvRCSB PDB    PDBbindADE
4trcRCSB PDB    PDBbindADE
Entry Information
PDB ID2p8n
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameRicin A chain
Ligand NameADE
EC.Number E.C.3.2.2.22
Resolution 1.94(Å)
Affinity (Kd/Ki/IC50)Kd=0.7mM
Release Year2007
Protein/NA SequenceCheck fasta file
Primary Reference BMC Struct.Biol. 7: 72-72
Ligand Properties
Formula C5H5N5
Molecular Weight 135.127
Exact Mass 135.054
No. of atoms 15
No. of bonds 16
Polar Surface Area 80.48
LOGP Value -0.25      (Computed with XLOGP3)
0.52      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P02879  
Entrez Gene IDNCBI Entrez Gene ID: 8261245  
ASDInformation of known allosteric effects of PDB entries
 
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