Browse entries in the PDBbind-CN Database

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Related entries of code: 2pj5
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2jewRCSB PDB    PDBbind306aa, >2JEW_1|Chain... at 97%
2piyRCSB PDB    PDBbind306aa, >2PIY_1|Chains... at 97%
2pizRCSB PDB    PDBbind306aa, >2PIZ_1|Chains... at 97%
2pj0RCSB PDB    PDBbind306aa, >2PJ0_1|Chains... at 97%
2pj1RCSB PDB    PDBbind306aa, >2PJ1_1|Chains... at 97%
2pj2RCSB PDB    PDBbind306aa, >2PJ2_1|Chains... at 97%
2pj3RCSB PDB    PDBbind306aa, >2PJ3_1|Chains... at 97%
2pj4RCSB PDB    PDBbind306aa, >2PJ4_1|Chains... at 97%
2pj6RCSB PDB    PDBbind306aa, >2PJ6_1|Chain... at 97%
2pj7RCSB PDB    PDBbind306aa, >2PJ7_1|Chains... at 97%
2pj8RCSB PDB    PDBbind306aa, >2PJ8_1|Chains... at 97%
2pj9RCSB PDB    PDBbind306aa, >2PJ9_1|Chain... at 97%
2pjaRCSB PDB    PDBbind306aa, >2PJA_1|Chains... at 97%
2pjbRCSB PDB    PDBbind306aa, >2PJB_1|Chains... at 97%
2pjcRCSB PDB    PDBbind306aa, >2PJC_1|Chains... at 97%
3wabRCSB PDB    PDBbind306aa, >3WAB_1|Chain... at 97%
3wc5RCSB PDB    PDBbind306aa, >3WC5_1|Chain... at 97%
3wc7RCSB PDB    PDBbind306aa, >3WC7_1|Chain... at 97%
4uiaRCSB PDB    PDBbind307aa, >4UIA_1|Chain... *
4uibRCSB PDB    PDBbind307aa, >4UIB_1|Chain... at 100%
5lrgRCSB PDB    PDBbind306aa, >5LRG_1|Chains... at 97%
5lrjRCSB PDB    PDBbind306aa, >5LRJ_1|Chains... at 97%
5lrkRCSB PDB    PDBbind306aa, >5LRK_1|Chains... at 97%
5zeqRCSB PDB    PDBbind304aa, >5ZEQ_1|Chain... at 97%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID2pj5
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameCarboxypeptidase B
Ligand Name11B
EC.Number E.C.3.4.17.2
Resolution 1.65(Å)
Affinity (Kd/Ki/IC50)IC50=15nM
Release Year2008
Protein/NA SequenceCheck fasta file
Primary Reference (2008) Acta Crystallogr.,Sect.D Vol. 64: pp. 149-157
Ligand Properties
Formula C23H33N4O7P
Molecular Weight 508.504
Exact Mass 508.209
No. of atoms 68
No. of bonds 69
Polar Surface Area 204.92
LOGP Value 5.33      (Computed with XLOGP3)
3.19      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 14
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P09955  
Entrez Gene IDNCBI Entrez Gene ID: 397341  
ASDInformation of known allosteric effects of PDB entries
 
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