Browse entries in the PDBbind-CN Database

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Related entries of code: 2q88
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2q89RCSB PDB    PDBbind257aa, >2Q89_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2vpnRCSB PDB    PDBbind4CS
3fxbRCSB PDB    PDBbind4CS
3pprRCSB PDB    PDBbind4CS

Entry Information
PDB ID2q88
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NamePutative ABC transporter amino acid-binding protein
Ligand Name4CS
EC.Number E.C.-.-.-.-
Resolution 1.9(Å)
Affinity (Kd/Ki/IC50)Kd=1.6uM
Release Year2008
Protein/NA SequenceCheck fasta file
Primary Reference (2007) J.Mol.Biol. Vol. 374: pp. 1237-1250
Ligand Properties
Formula C6H10N2O2
Molecular Weight 142.156
Exact Mass 142.074
No. of atoms 20
No. of bonds 20
Polar Surface Area 61.69
LOGP Value 0.09      (Computed with XLOGP3)
-0.38      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 2
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q92WC8  
Entrez Gene IDNCBI Entrez Gene ID: 25012808  61600421  
ASDInformation of known allosteric effects of PDB entries

 
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