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Related entries of code: 2v5a
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2v58RCSB PDB    PDBbind449aa, >2V58_1|Chains... at 100%
2v59RCSB PDB    PDBbind449aa, >2V59_1|Chains... at 100%
2w6mRCSB PDB    PDBbind449aa, >2W6M_1|Chains... at 100%
2w6nRCSB PDB    PDBbind449aa, >2W6N_1|Chains... at 100%
2w6oRCSB PDB    PDBbind449aa, >2W6O_1|Chains... at 100%
2w6pRCSB PDB    PDBbind449aa, >2W6P_1|Chains... at 100%
2w6qRCSB PDB    PDBbind449aa, >2W6Q_1|Chains... at 100%
2w6zRCSB PDB    PDBbind449aa, >2W6Z_1|Chains... at 100%
2w70RCSB PDB    PDBbind449aa, >2W70_1|Chains... at 100%
2w71RCSB PDB    PDBbind449aa, >2W71_1|Chains... at 100%
3jzfRCSB PDB    PDBbind486aa, >3JZF_1|Chains... *
3jziRCSB PDB    PDBbind486aa, >3JZI_1|Chains... at 100%
3rupRCSB PDB    PDBbind452aa, >3RUP_1|Chains... at 99%
3rv3RCSB PDB    PDBbind452aa, >3RV3_1|Chains... at 99%
3rv4RCSB PDB    PDBbind452aa, >3RV4_1|Chain... at 99%
6oi9RCSB PDB    PDBbind469aa, >6OI9_1|Chains... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID2v5a
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameBiotin carboxylase (BC)
Ligand NameLZL
EC.Number E.C.6.3.4.14
Resolution 2.31(Å)
Affinity (Kd/Ki/IC50)IC50=150nM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2009) Proc.Natl.Acad.Sci.USA Vol. 106: pp. 1737-1742
Ligand Properties
Formula C17H17N5
Molecular Weight 291.350
Exact Mass 291.148
No. of atoms 39
No. of bonds 42
Polar Surface Area 67.93
LOGP Value 3.03      (Computed with XLOGP3)
3.52      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P24182  
Entrez Gene IDNCBI Entrez Gene ID: 61730792  947761  
ASDInformation of known allosteric effects of PDB entries
 
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