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Related entries of code: 2vzr
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2x09RCSB PDB    PDBbind1032aa, >2X09_1|Chains... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2w87RCSB PDB    PDBbindGCU

Entry Information
PDB ID2vzr
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameExo-Beta-D-Glucosaminidase
Ligand NameGCU
EC.Number E.C.-.-.-.-
Resolution 1.95(Å)
Affinity (Kd/Ki/IC50)Kd=52.6uM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2009) Proc.Natl.Acad.Sci.USA Vol. 106: pp. 3065-3070
Ligand Properties
Formula C6H10O7
Molecular Weight 194.139
Exact Mass 194.043
No. of atoms 23
No. of bonds 23
Polar Surface Area 127.45
LOGP Value -1.46      (Computed with XLOGP3)
-3.13      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q56F26  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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