Browse entries in the PDBbind-CN Database

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Related entries of code: 2w92
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1hp5RCSB PDB    PDBbindNGT
1np0RCSB PDB    PDBbindNGT
2epnRCSB PDB    PDBbindNGT
3surRCSB PDB    PDBbindNGT
5a6aRCSB PDB    PDBbindNGT
Entry Information
PDB ID2w92
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namecatalytic domain (SpGH85) of Endo-beta-D-glucosaminidases
Ligand NameNGT
EC.Number E.C.-.-.-.-
Resolution 1.65(Å)
Affinity (Kd/Ki/IC50)Kd=28uM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2009) J.Biol.Chem. Vol. 284: pp. 11676-11689
Ligand Properties
Formula C8H13NO4S
Molecular Weight 219.258
Exact Mass 219.057
No. of atoms 27
No. of bonds 28
Polar Surface Area 107.58
LOGP Value -1.14      (Computed with XLOGP3)
-1.61      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q93HW0  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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