Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 2wc3
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1oifRCSB PDB    PDBbind468aa, >1OIF_1|Chains... *
1oimRCSB PDB    PDBbind468aa, >1OIM_1|Chains... at 100%
1uz1RCSB PDB    PDBbind468aa, >1UZ1_1|Chains... at 100%
1w3jRCSB PDB    PDBbind468aa, >1W3J_1|Chains... at 100%
2cbuRCSB PDB    PDBbind468aa, >2CBU_1|Chains... at 100%
2cbvRCSB PDB    PDBbind468aa, >2CBV_1|Chains... at 100%
2cesRCSB PDB    PDBbind468aa, >2CES_1|Chains... at 100%
2cetRCSB PDB    PDBbind468aa, >2CET_1|Chains... at 100%
2j75RCSB PDB    PDBbind468aa, >2J75_1|Chains... at 100%
2j77RCSB PDB    PDBbind468aa, >2J77_1|Chains... at 100%
2j78RCSB PDB    PDBbind468aa, >2J78_1|Chains... at 100%
2j79RCSB PDB    PDBbind468aa, >2J79_1|Chains... at 100%
2j7bRCSB PDB    PDBbind468aa, >2J7B_1|Chains... at 100%
2j7dRCSB PDB    PDBbind468aa, >2J7D_1|Chains... at 100%
2j7eRCSB PDB    PDBbind468aa, >2J7E_1|Chains... at 100%
2j7fRCSB PDB    PDBbind468aa, >2J7F_1|Chains... at 100%
2j7gRCSB PDB    PDBbind468aa, >2J7G_1|Chains... at 100%
2j7hRCSB PDB    PDBbind468aa, >2J7H_1|Chains... at 100%
2jalRCSB PDB    PDBbind468aa, >2JAL_1|Chains... at 100%
2vrjRCSB PDB    PDBbind468aa, >2VRJ_1|Chains... at 100%
2wbgRCSB PDB    PDBbind468aa, >2WBG_1|Chains... at 100%
2wc4RCSB PDB    PDBbind468aa, >2WC4_1|Chains... at 100%
5n6sRCSB PDB    PDBbind468aa, >5N6S_1|Chains... at 100%
5ossRCSB PDB    PDBbind468aa, >5OSS_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID2wc3
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameBETA-GLUCOSIDASE A
Ligand NameAM3
EC.Number E.C.3.2.1.21
Resolution 2(Å)
Affinity (Kd/Ki/IC50)Ki=0.83uM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2009) Org.Biomol.Chem. Vol. 7: pp. 2738-2747.
Ligand Properties
Formula C15H28N2O5
Molecular Weight 316.393
Exact Mass 316.200
No. of atoms 50
No. of bonds 51
Polar Surface Area 105.75
LOGP Value 0.90      (Computed with XLOGP3)
-0.24      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 11
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q08638  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com