Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 2xp7
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1f8aRCSB PDB    PDBbind167aa, >1F8A_1|Chain... *
2itkRCSB PDB    PDBbind167aa, >2ITK_1|Chain... at 99%
2xp3RCSB PDB    PDBbind167aa, >2XP3_1|Chain... at 99%
2xp4RCSB PDB    PDBbind167aa, >2XP4_1|Chain... at 99%
2xp5RCSB PDB    PDBbind167aa, >2XP5_1|Chain... at 99%
2xp6RCSB PDB    PDBbind167aa, >2XP6_1|Chain... at 98%
2xp8RCSB PDB    PDBbind167aa, >2XP8_1|Chain... at 99%
2xpaRCSB PDB    PDBbind167aa, >2XPA_1|Chain... at 99%
2xpbRCSB PDB    PDBbind167aa, >2XPB_1|Chain... at 99%
3i6cRCSB PDB    PDBbind123aa, >3I6C_1|Chains... at 95%
3ikdRCSB PDB    PDBbind123aa, >3IKD_1|Chains... at 95%
3ikgRCSB PDB    PDBbind123aa, >3IKG_1|Chains... at 95%
3jyjRCSB PDB    PDBbind123aa, >3JYJ_1|Chains... at 95%
3kabRCSB PDB    PDBbind167aa, >3KAB_1|Chain... at 99%
3kacRCSB PDB    PDBbind123aa, >3KAC_1|Chains... at 96%
3kadRCSB PDB    PDBbind167aa, >3KAD_1|Chain... at 98%
3kafRCSB PDB    PDBbind167aa, >3KAF_1|Chain... at 98%
3kagRCSB PDB    PDBbind167aa, >3KAG_1|Chain... at 99%
3kahRCSB PDB    PDBbind167aa, >3KAH_1|Chain... at 99%
3kaiRCSB PDB    PDBbind167aa, >3KAI_1|Chain... at 99%
3kceRCSB PDB    PDBbind167aa, >3KCE_1|Chain... at 99%
3ntpRCSB PDB    PDBbind167aa, >3NTP_1|Chain... at 99%
3odkRCSB PDB    PDBbind167aa, >3ODK_1|Chain... at 99%
3oobRCSB PDB    PDBbind163aa, >3OOB_1|Chain... at 99%
3tc5RCSB PDB    PDBbind166aa, >3TC5_1|Chain... at 97%
4tyoRCSB PDB    PDBbind123aa, >4TYO_1|Chains... at 95%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID2xp7
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NamePEPTIDYL-PROLYL CIS-TRANS ISOMERASE NIMA-INTERACTING 1
Ligand Name4F8
EC.Number E.C.5.2.1.8
Resolution 2(Å)
Affinity (Kd/Ki/IC50)Kd=1.7uM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2010) Bioorg.Med.Chem.Lett. Vol. 20: pp. 6483-6488
Ligand Properties
Formula C11H8N2O4
Molecular Weight 232.192
Exact Mass 232.048
No. of atoms 25
No. of bonds 26
Polar Surface Area 103.28
LOGP Value 3.02      (Computed with XLOGP3)
1.47      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 1
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q13526  
Entrez Gene IDNCBI Entrez Gene ID: 5300  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com