Browse entries in the PDBbind-CN Database

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Related entries of code: 2y2p
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2y2hRCSB PDB    PDBbind494aa, >2Y2H_1|Chains... *
2y2iRCSB PDB    PDBbind494aa, >2Y2I_1|Chain... at 100%
2y2jRCSB PDB    PDBbind494aa, >2Y2J_1|Chain... at 100%
2y2kRCSB PDB    PDBbind494aa, >2Y2K_1|Chain... at 100%
2y2nRCSB PDB    PDBbind494aa, >2Y2N_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID2y2p
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePENICILLIN-BINDING PROTEIN 1B
Ligand NameZ10
EC.Number E.C.2.4.1.129
Resolution 1.62(Å)
Affinity (Kd/Ki/IC50)IC50=20uM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2011) Acs Chem.Biol. Vol. 6: pp. 943
Ligand Properties
Formula C15H15BFNO3
Molecular Weight 287.094
Exact Mass 287.113
No. of atoms 36
No. of bonds 37
Polar Surface Area 69.56
LOGP Value 2.30      (Computed with XLOGP3)
2.43      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q7CRA4  
Entrez Gene IDNCBI Entrez Gene ID: 60233132  
ASDInformation of known allosteric effects of PDB entries

 
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