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Related entries of code: 2zbk
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1bgqRCSB PDB    PDBbindRDC
2q8iRCSB PDB    PDBbindRDC
2werRCSB PDB    PDBbindRDC
3cgyRCSB PDB    PDBbindRDC
4egkRCSB PDB    PDBbindRDC

Entry Information
PDB ID2zbk
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Nametopo VI
Ligand NameRDC
EC.Number E.C.5.99.1.3
Resolution 3.56(Å)
Affinity (Kd/Ki/IC50)Kd=2uM
Release Year2008
Protein/NA SequenceCheck fasta file
Primary Reference (2008) Structure Vol. 16: pp. 360-370
Ligand Properties
Formula C18H17ClO6
Molecular Weight 364.777
Exact Mass 364.071
No. of atoms 42
No. of bonds 44
Polar Surface Area 96.36
LOGP Value 3.36      (Computed with XLOGP3)
2.69      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): O05207  O05208  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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