Browse entries in the PDBbind-CN Database

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Related entries of code: 3dba
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
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Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2k31RCSB PDB    PDBbind35G

Entry Information
PDB ID3dba
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameGAF A domain of chicken cone PDE6C
Ligand Name35G
EC.Number E.C.3.1.4.35
Resolution 2.57(Å)
Affinity (Kd/Ki/IC50)Kd=10nM
Release Year2008
Protein/NA SequenceCheck fasta file
Primary Reference (2008) J.Biol.Chem. Vol. 283: pp. 25913-25919
Ligand Properties
Formula C10H14N5O7P
Molecular Weight 347.221
Exact Mass 347.063
No. of atoms 37
No. of bonds 40
Polar Surface Area 192.81
LOGP Value -2.18      (Computed with XLOGP3)
-1.96      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 2
No. of Nitrogen and Oxygen Atoms: 12
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P52731  
Entrez Gene IDNCBI Entrez Gene ID: 395834  
ASDInformation of known allosteric effects of PDB entries

 
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