Browse entries in the PDBbind-CN Database

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Related entries of code: 3h06
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1ftjRCSB PDB    PDBbind263aa, >1FTJ_1|Chains... at 98%
1ftkRCSB PDB    PDBbind279aa, >1FTK_1|Chain... *
1ftlRCSB PDB    PDBbind263aa, >1FTL_1|Chains... at 98%
1ftmRCSB PDB    PDBbind263aa, >1FTM_1|Chains... at 98%
1fw0RCSB PDB    PDBbind263aa, >1FW0_1|Chain... at 98%
1m5bRCSB PDB    PDBbind263aa, >1M5B_1|Chains... at 98%
1m5cRCSB PDB    PDBbind263aa, >1M5C_1|Chain... at 98%
1m5dRCSB PDB    PDBbind263aa, >1M5D_1|Chain... at 98%
1m5eRCSB PDB    PDBbind263aa, >1M5E_1|Chains... at 98%
1m5fRCSB PDB    PDBbind263aa, >1M5F_1|Chains... at 98%
1mm6RCSB PDB    PDBbind263aa, >1MM6_1|Chains... at 98%
1mm7RCSB PDB    PDBbind263aa, >1MM7_1|Chains... at 98%
1mqdRCSB PDB    PDBbind261aa, >1MQD_1|Chains... at 98%
1mqgRCSB PDB    PDBbind263aa, >1MQG_1|Chains... at 98%
1mqhRCSB PDB    PDBbind263aa, >1MQH_1|Chain... at 98%
1mqiRCSB PDB    PDBbind263aa, >1MQI_1|Chain... at 98%
1mqjRCSB PDB    PDBbind263aa, >1MQJ_1|Chain... at 98%
1ms7RCSB PDB    PDBbind263aa, >1MS7_1|Chains... at 98%
1mxuRCSB PDB    PDBbind263aa, >1MXU_1|Chains... at 98%
1my2RCSB PDB    PDBbind263aa, >1MY2_1|Chains... at 98%
1my3RCSB PDB    PDBbind263aa, >1MY3_1|Chains... at 98%
1my4RCSB PDB    PDBbind263aa, >1MY4_1|Chains... at 98%
1n0tRCSB PDB    PDBbind263aa, >1N0T_1|Chains... at 98%
1nnkRCSB PDB    PDBbind263aa, >1NNK_1|Chain... at 98%
1p1nRCSB PDB    PDBbind263aa, >1P1N_1|Chain... at 98%
1p1oRCSB PDB    PDBbind263aa, >1P1O_1|Chain... at 98%
1p1qRCSB PDB    PDBbind263aa, >1P1Q_1|Chains... at 98%
1syhRCSB PDB    PDBbind263aa, >1SYH_1|Chain... at 98%
1syiRCSB PDB    PDBbind263aa, >1SYI_1|Chains... at 98%
1wvjRCSB PDB    PDBbind263aa, >1WVJ_1|Chain... at 98%
1xhyRCSB PDB    PDBbind263aa, >1XHY_1|Chain... at 98%
2al5RCSB PDB    PDBbind263aa, >2AL5_1|Chains... at 98%
2cmoRCSB PDB    PDBbind263aa, >2CMO_1|Chains... at 98%
2i3vRCSB PDB    PDBbind259aa, >2I3V_1|Chains... at 99%
2p2aRCSB PDB    PDBbind263aa, >2P2A_1|Chains... at 98%
3bftRCSB PDB    PDBbind263aa, >3BFT_1|Chains... at 98%
3bfuRCSB PDB    PDBbind263aa, >3BFU_1|Chains... at 98%
3bkiRCSB PDB    PDBbind263aa, >3BKI_1|Chains... at 98%
3h03RCSB PDB    PDBbind258aa, >3H03_1|Chains... at 99%
3pd8RCSB PDB    PDBbind261aa, >3PD8_1|Chains... at 99%
3pd9RCSB PDB    PDBbind260aa, >3PD9_1|Chains... at 99%
3rtfRCSB PDB    PDBbind258aa, >3RTF_1|Chains... at 99%
3tdjRCSB PDB    PDBbind263aa, >3TDJ_1|Chains... at 98%
3tzaRCSB PDB    PDBbind263aa, >3TZA_1|Chains... at 98%
3ua8RCSB PDB    PDBbind263aa, >3UA8_1|Chain... at 98%
4g8mRCSB PDB    PDBbind263aa, >4G8M_1|Chains... at 98%
4gxsRCSB PDB    PDBbind258aa, >4GXS_1|Chains... at 99%
4igtRCSB PDB    PDBbind263aa, >4IGT_1|Chain... at 98%
4isuRCSB PDB    PDBbind263aa, >4ISU_1|Chains... at 98%
4n07RCSB PDB    PDBbind263aa, >4N07_1|Chains... at 98%
4o3aRCSB PDB    PDBbind263aa, >4O3A_1|Chains... at 98%
4o3bRCSB PDB    PDBbind263aa, >4O3B_1|Chains... at 98%
4o3cRCSB PDB    PDBbind263aa, >4O3C_1|Chain... at 98%
4u4sRCSB PDB    PDBbind263aa, >4U4S_1|Chains... at 98%
4u4xRCSB PDB    PDBbind263aa, >4U4X_1|Chains... at 98%
4x48RCSB PDB    PDBbind275aa, >4X48_1|Chains... at 98%
5cbrRCSB PDB    PDBbind264aa, >5CBR_1|Chain... at 98%
5cbsRCSB PDB    PDBbind264aa, >5CBS_1|Chains... at 98%
5elvRCSB PDB    PDBbind264aa, >5ELV_1|Chains... at 97%
5fhmRCSB PDB    PDBbind264aa, >5FHM_1|Chains... at 98%
5fhnRCSB PDB    PDBbind264aa, >5FHN_1|Chain... at 98%
5fhoRCSB PDB    PDBbind264aa, >5FHO_1|Chains... at 98%
5ng9RCSB PDB    PDBbind264aa, >5NG9_1|Chain... at 98%
5nihRCSB PDB    PDBbind264aa, >5NIH_1|Chains... at 98%
6q60RCSB PDB    PDBbind264aa, >6Q60_1|Chains... at 98%
6q54RCSB PDB    PDBbind264aa, >6Q54_1|Chains... at 98%
5zg3RCSB PDB    PDBbind263aa, >5ZG3_1|Chains... at 98%
5zg1RCSB PDB    PDBbind263aa, >5ZG1_1|Chains... at 98%
5zg0RCSB PDB    PDBbind263aa, >5ZG0_1|Chains... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID3h06
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameGluR2 AMPA receptor
Ligand NameVBP
EC.Number E.C.-.-.-.-
Resolution 2.8(Å)
Affinity (Kd/Ki/IC50)IC50=292uM
Release Year2009
Protein/NA SequenceCheck fasta file
Primary Reference (2009) Biochemistry Vol. 48: pp. 3894-3903
Ligand Properties
Formula C15H32N3O6
Molecular Weight 350.431
Exact Mass 350.229
No. of atoms 56
No. of bonds 57
Polar Surface Area 154.74
LOGP Value -2.68      (Computed with XLOGP3)
-2.30      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 7
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 9
No. of Nitrogen and Oxygen Atoms: 9
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P19491  
Entrez Gene IDNCBI Entrez Gene ID: 29627  
ASDInformation of known allosteric effects of PDB entries
 
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