Browse entries in the PDBbind-CN Database

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Related entries of code: 3ldq
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3m3zRCSB PDB    PDBbind114aa, >3M3Z_2|Chain... at 99%
5aqfRCSB PDB    PDBbind118aa, >5AQF_2|Chains... *
5aqgRCSB PDB    PDBbind118aa, >5AQG_2|Chains... at 100%
5aqhRCSB PDB    PDBbind118aa, >5AQH_2|Chain... at 100%
5aqjRCSB PDB    PDBbind118aa, >5AQJ_2|Chains... at 100%
5aqkRCSB PDB    PDBbind118aa, >5AQK_2|Chain... at 100%
5aqnRCSB PDB    PDBbind118aa, >5AQN_2|Chains... at 100%
5aqoRCSB PDB    PDBbind118aa, >5AQO_2|Chains... at 100%
5aqpRCSB PDB    PDBbind118aa, >5AQP_2|Chains... at 100%
5aqqRCSB PDB    PDBbind118aa, >5AQQ_2|Chains... at 100%
5aqrRCSB PDB    PDBbind118aa, >5AQR_2|Chains... at 100%
5aqtRCSB PDB    PDBbind118aa, >5AQT_2|Chain... at 100%
5aquRCSB PDB    PDBbind118aa, >5AQU_2|Chain... at 100%
5aqvRCSB PDB    PDBbind118aa, >5AQV_2|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
3ldpRCSB PDB    PDBbind3P1
Entry Information
PDB ID3ldq
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameHeat shock cognate 71 kDa protein, Hsc70
Ligand Name3P1
EC.Number E.C.-.-.-.-
Resolution 1.9(Å)
Affinity (Kd/Ki/IC50)Ki=4.32uM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2011) J.Med.Chem. Vol. 54: pp. 4034-4041
Ligand Properties
Formula C20H21N7O4
Molecular Weight 423.425
Exact Mass 423.166
No. of atoms 52
No. of bonds 56
Polar Surface Area 164.46
LOGP Value 0.21      (Computed with XLOGP3)
0.83      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 8
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P11142  Q99933  
Entrez Gene IDNCBI Entrez Gene ID: 3312  573  
ASDInformation of known allosteric effects of PDB entries
 
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