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Related entries of code: 3okp
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3okaRCSB PDB    PDBbind381aa, >3OKA_1|Chains... at 100%
3okcRCSB PDB    PDBbind394aa, >3OKC_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2gejRCSB PDB    PDBbindGDD
3okaRCSB PDB    PDBbindGDD
5ogkRCSB PDB    PDBbindGDD
Entry Information
PDB ID3okp
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameGDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase:
Ligand NameGDD
EC.Number E.C.2.4.1.57
Resolution 2(Å)
Affinity (Kd/Ki/IC50)Kd=19uM
Release Year2010
Protein/NA SequenceCheck fasta file
Primary Reference (2010) J.Biol.Chem. Vol. 285: pp. 37741-37752
Ligand Properties
Formula C10H18N5O11P2
Molecular Weight 446.224
Exact Mass 446.048
No. of atoms 46
No. of bonds 48
Polar Surface Area 288.54
LOGP Value -4.43      (Computed with XLOGP3)
-5.32      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 9
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 16
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q8NNK8  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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