Browse entries in the PDBbind-CN Database

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Related entries of code: 3p7i
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
No similar entries are found!
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
6ssyRCSB PDB    PDBbindP7I
Entry Information
PDB ID3p7i
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NamePhnD, subunit of alkylphosphonate ABC transporter, EcPhnD
Ligand NameP7I
EC.Number E.C.-.-.-.-
Resolution 1.71(Å)
Affinity (Kd/Ki/IC50)Kd=19.9nM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2011) J.Mol.Biol. Vol. 414: pp. 356-369
Ligand Properties
Formula C2H10NO3P
Molecular Weight 127.079
Exact Mass 127.040
No. of atoms 17
No. of bonds 16
Polar Surface Area 101.92
LOGP Value -4.98      (Computed with XLOGP3)
-2.03      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 1
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q1R3F7  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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