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Related entries of code: 3rbm
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3ldwRCSB PDB    PDBbind396aa, >3LDW_1|Chains... *
3rywRCSB PDB    PDBbind396aa, >3RYW_1|Chains... at 100%
5hn7RCSB PDB    PDBbind375aa, >5HN7_1|Chains... at 100%
5hn8RCSB PDB    PDBbind375aa, >5HN8_1|Chains... at 100%
5hn9RCSB PDB    PDBbind375aa, >5HN9_1|Chains... at 100%
5hnaRCSB PDB    PDBbind375aa, >5HNA_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID3rbm
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameFarnesyl pyrophosphate synthase
Ligand NameB73
EC.Number E.C.-.-.-.-
Resolution 2.61(Å)
Affinity (Kd/Ki/IC50)Ki=270nM
Release Year2012
Protein/NA SequenceCheck fasta file
Primary Reference (2012) Proc.Natl.Acad.Sci.USA Vol. 109: pp. 4058-4063
Ligand Properties
Formula C17H37N2O6P2
Molecular Weight 427.433
Exact Mass 427.213
No. of atoms 64
No. of bonds 64
Polar Surface Area 158.42
LOGP Value 1.78      (Computed with XLOGP3)
3.30      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 0
No. of Hydrogen Bond Acceptors: 6
No. of Rotatable Bonds: 13
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): A5K4U6  
Entrez Gene IDNCBI Entrez Gene ID: 5474697  
ASDInformation of known allosteric effects of PDB entries
 
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