Browse entries in the PDBbind-CN Database

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Related entries of code: 3rpy
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1aq1RCSB PDB    PDBbind298aa, >1AQ1_1|Chain... at 100%
1b38RCSB PDB    PDBbind299aa, >1B38_1|Chain... at 99%
1b39RCSB PDB    PDBbind299aa, >1B39_1|Chain... at 99%
1di8RCSB PDB    PDBbind298aa, >1DI8_1|Chain... at 100%
1dm2RCSB PDB    PDBbind298aa, >1DM2_1|Chain... at 100%
1e1vRCSB PDB    PDBbind299aa, >1E1V_1|Chain... at 99%
1e1xRCSB PDB    PDBbind299aa, >1E1X_1|Chain... at 99%
1fvtRCSB PDB    PDBbind298aa, >1FVT_1|Chain... at 100%
1g5sRCSB PDB    PDBbind298aa, >1G5S_1|Chain... at 100%
1h00RCSB PDB    PDBbind299aa, >1H00_1|Chain... at 99%
1h01RCSB PDB    PDBbind298aa, >1H01_1|Chain... at 100%
1h07RCSB PDB    PDBbind299aa, >1H07_1|Chain... at 99%
1h08RCSB PDB    PDBbind299aa, >1H08_1|Chain... at 99%
1h0wRCSB PDB    PDBbind298aa, >1H0W_1|Chain... at 100%
1jsvRCSB PDB    PDBbind298aa, >1JSV_1|Chain... at 100%
1jvpRCSB PDB    PDBbind298aa, >1JVP_1|Chain... at 100%
1ke5RCSB PDB    PDBbind298aa, >1KE5_1|Chain... at 100%
1ke6RCSB PDB    PDBbind298aa, >1KE6_1|Chain... at 100%
1ke7RCSB PDB    PDBbind298aa, >1KE7_1|Chain... at 100%
1ke8RCSB PDB    PDBbind298aa, >1KE8_1|Chain... at 100%
1ke9RCSB PDB    PDBbind298aa, >1KE9_1|Chain... at 100%
1oiqRCSB PDB    PDBbind299aa, >1OIQ_1|Chain... at 99%
1oirRCSB PDB    PDBbind299aa, >1OIR_1|Chain... at 99%
1oitRCSB PDB    PDBbind299aa, >1OIT_1|Chain... at 99%
1p2aRCSB PDB    PDBbind298aa, >1P2A_1|Chain... at 100%
1pf8RCSB PDB    PDBbind298aa, >1PF8_1|Chain... at 100%
1pxiRCSB PDB    PDBbind298aa, >1PXI_1|Chain... at 100%
1pxjRCSB PDB    PDBbind298aa, >1PXJ_1|Chain... at 100%
1pxkRCSB PDB    PDBbind298aa, >1PXK_1|Chain... at 100%
1pxlRCSB PDB    PDBbind298aa, >1PXL_1|Chain... at 100%
1pxmRCSB PDB    PDBbind298aa, >1PXM_1|Chain... at 100%
1pxnRCSB PDB    PDBbind298aa, >1PXN_1|Chain... at 100%
1pxoRCSB PDB    PDBbind298aa, >1PXO_1|Chain... at 100%
1pxpRCSB PDB    PDBbind298aa, >1PXP_1|Chain... at 100%
1pyeRCSB PDB    PDBbind298aa, >1PYE_1|Chain... at 100%
1r78RCSB PDB    PDBbind298aa, >1R78_1|Chain... at 100%
1urwRCSB PDB    PDBbind299aa, >1URW_1|Chain... at 99%
1v1kRCSB PDB    PDBbind299aa, >1V1K_1|Chain... at 99%
1vyzRCSB PDB    PDBbind298aa, >1VYZ_1|Chain... at 100%
1w0xRCSB PDB    PDBbind298aa, >1W0X_1|Chain... at 100%
1wccRCSB PDB    PDBbind298aa, >1WCC_1|Chain... at 100%
1y91RCSB PDB    PDBbind298aa, >1Y91_1|Chain... at 100%
1ykrRCSB PDB    PDBbind298aa, >1YKR_1|Chain... at 100%
2a0cRCSB PDB    PDBbind298aa, >2A0C_1|Chain... at 100%
2a4lRCSB PDB    PDBbind298aa, >2A4L_1|Chain... at 100%
2b52RCSB PDB    PDBbind298aa, >2B52_1|Chain... at 100%
2b53RCSB PDB    PDBbind298aa, >2B53_1|Chain... at 100%
2b54RCSB PDB    PDBbind298aa, >2B54_1|Chain... at 100%
2b55RCSB PDB    PDBbind298aa, >2B55_1|Chain... at 100%
2btrRCSB PDB    PDBbind298aa, >2BTR_1|Chain... at 100%
2btsRCSB PDB    PDBbind298aa, >2BTS_1|Chain... at 100%
2c5yRCSB PDB    PDBbind298aa, >2C5Y_1|Chain... at 100%
2c68RCSB PDB    PDBbind298aa, >2C68_1|Chain... at 100%
2c69RCSB PDB    PDBbind298aa, >2C69_1|Chain... at 100%
2c6iRCSB PDB    PDBbind298aa, >2C6I_1|Chain... at 100%
2c6kRCSB PDB    PDBbind298aa, >2C6K_1|Chain... at 100%
2c6lRCSB PDB    PDBbind298aa, >2C6L_1|Chain... at 100%
2c6mRCSB PDB    PDBbind298aa, >2C6M_1|Chain... at 100%
2c6oRCSB PDB    PDBbind298aa, >2C6O_1|Chain... at 100%
2clxRCSB PDB    PDBbind298aa, >2CLX_1|Chain... at 100%
2ds1RCSB PDB    PDBbind298aa, >2DS1_1|Chain... at 98%
2duvRCSB PDB    PDBbind298aa, >2DUV_1|Chain... at 100%
2exmRCSB PDB    PDBbind298aa, >2EXM_1|Chain... at 100%
2fvdRCSB PDB    PDBbind298aa, >2FVD_1|Chain... at 100%
2r3fRCSB PDB    PDBbind299aa, >2R3F_1|Chain... at 99%
2r3gRCSB PDB    PDBbind299aa, >2R3G_1|Chain... at 99%
2r3hRCSB PDB    PDBbind299aa, >2R3H_1|Chain... at 99%
2r3iRCSB PDB    PDBbind299aa, >2R3I_1|Chain... at 99%
2r3jRCSB PDB    PDBbind299aa, >2R3J_1|Chain... at 99%
2r3kRCSB PDB    PDBbind299aa, >2R3K_1|Chain... at 99%
2r3lRCSB PDB    PDBbind299aa, >2R3L_1|Chain... at 99%
2r3mRCSB PDB    PDBbind299aa, >2R3M_1|Chain... at 99%
2r3nRCSB PDB    PDBbind299aa, >2R3N_1|Chain... at 99%
2r3oRCSB PDB    PDBbind299aa, >2R3O_1|Chain... at 99%
2r3pRCSB PDB    PDBbind299aa, >2R3P_1|Chain... at 99%
2r64RCSB PDB    PDBbind298aa, >2R64_1|Chain... at 100%
2uznRCSB PDB    PDBbind298aa, >2UZN_1|Chain... at 100%
2uzoRCSB PDB    PDBbind298aa, >2UZO_1|Chain... at 100%
2vtaRCSB PDB    PDBbind298aa, >2VTA_1|Chain... at 100%
2vthRCSB PDB    PDBbind298aa, >2VTH_1|Chain... at 100%
2vtiRCSB PDB    PDBbind298aa, >2VTI_1|Chain... at 100%
2vtjRCSB PDB    PDBbind298aa, >2VTJ_1|Chain... at 100%
2vtlRCSB PDB    PDBbind298aa, >2VTL_1|Chain... at 100%
2vtmRCSB PDB    PDBbind298aa, >2VTM_1|Chain... at 100%
2vtnRCSB PDB    PDBbind298aa, >2VTN_1|Chain... at 100%
2vtoRCSB PDB    PDBbind298aa, >2VTO_1|Chain... at 100%
2vtpRCSB PDB    PDBbind298aa, >2VTP_1|Chain... at 100%
2vtqRCSB PDB    PDBbind298aa, >2VTQ_1|Chain... at 100%
2vtrRCSB PDB    PDBbind298aa, >2VTR_1|Chain... at 100%
2vtsRCSB PDB    PDBbind298aa, >2VTS_1|Chain... at 100%
2vttRCSB PDB    PDBbind298aa, >2VTT_1|Chain... at 100%
2vu3RCSB PDB    PDBbind298aa, >2VU3_1|Chain... at 100%
2vv9RCSB PDB    PDBbind299aa, >2VV9_1|Chain... at 99%
2w05RCSB PDB    PDBbind298aa, >2W05_1|Chain... at 100%
2w06RCSB PDB    PDBbind299aa, >2W06_1|Chain... at 99%
2w17RCSB PDB    PDBbind299aa, >2W17_1|Chain... at 99%
2w1hRCSB PDB    PDBbind298aa, >2W1H_1|Chain... at 100%
2xmyRCSB PDB    PDBbind298aa, >2XMY_1|Chain... at 100%
2xnbRCSB PDB    PDBbind298aa, >2XNB_1|Chain... at 100%
3ezrRCSB PDB    PDBbind300aa, >3EZR_1|Chain... at 99%
3ezvRCSB PDB    PDBbind300aa, >3EZV_1|Chain... at 99%
3fz1RCSB PDB    PDBbind298aa, >3FZ1_1|Chain... at 100%
3ig7RCSB PDB    PDBbind299aa, >3IG7_1|Chain... at 99%
3iggRCSB PDB    PDBbind299aa, >3IGG_1|Chain... at 99%
3le6RCSB PDB    PDBbind298aa, >3LE6_1|Chain... at 100%
3lfnRCSB PDB    PDBbind298aa, >3LFN_1|Chain... at 100%
3lfsRCSB PDB    PDBbind298aa, >3LFS_1|Chain... at 100%
3ns9RCSB PDB    PDBbind298aa, >3NS9_1|Chain... at 100%
3pj8RCSB PDB    PDBbind299aa, >3PJ8_1|Chain... at 99%
3pxfRCSB PDB    PDBbind306aa, >3PXF_1|Chain... at 97%
3pxqRCSB PDB    PDBbind306aa, >3PXQ_1|Chain... at 97%
3pxyRCSB PDB    PDBbind306aa, >3PXY_1|Chain... at 97%
3pxzRCSB PDB    PDBbind306aa, >3PXZ_1|Chain... at 97%
3py0RCSB PDB    PDBbind306aa, >3PY0_1|Chain... at 97%
3py1RCSB PDB    PDBbind306aa, >3PY1_1|Chain... at 97%
3qqkRCSB PDB    PDBbind306aa, >3QQK_1|Chain... at 97%
3qtqRCSB PDB    PDBbind306aa, >3QTQ_1|Chain... at 97%
3qtrRCSB PDB    PDBbind306aa, >3QTR_1|Chain... at 97%
3qtsRCSB PDB    PDBbind306aa, >3QTS_1|Chain... at 97%
3qtuRCSB PDB    PDBbind306aa, >3QTU_1|Chain... at 97%
3qtwRCSB PDB    PDBbind306aa, >3QTW_1|Chain... at 97%
3qtxRCSB PDB    PDBbind306aa, >3QTX_1|Chain... at 97%
3qtzRCSB PDB    PDBbind306aa, >3QTZ_1|Chain... at 97%
3qu0RCSB PDB    PDBbind306aa, >3QU0_1|Chain... at 97%
3qxpRCSB PDB    PDBbind306aa, >3QXP_1|Chain... at 97%
3r8uRCSB PDB    PDBbind306aa, >3R8U_1|Chain... at 97%
3r8vRCSB PDB    PDBbind306aa, >3R8V_1|Chain... at 97%
3r8zRCSB PDB    PDBbind306aa, >3R8Z_1|Chain... at 97%
3r9dRCSB PDB    PDBbind306aa, >3R9D_1|Chain... at 97%
3r9hRCSB PDB    PDBbind306aa, >3R9H_1|Chain... at 97%
3r9nRCSB PDB    PDBbind306aa, >3R9N_1|Chain... at 97%
3r9oRCSB PDB    PDBbind306aa, >3R9O_1|Chain... at 97%
3rahRCSB PDB    PDBbind306aa, >3RAH_1|Chain... at 97%
3rakRCSB PDB    PDBbind306aa, >3RAK_1|Chain... at 97%
3ralRCSB PDB    PDBbind306aa, >3RAL_1|Chain... at 97%
3rjcRCSB PDB    PDBbind306aa, >3RJC_1|Chain... at 97%
3rk5RCSB PDB    PDBbind306aa, >3RK5_1|Chain... at 97%
3rk7RCSB PDB    PDBbind306aa, >3RK7_1|Chain... at 97%
3rk9RCSB PDB    PDBbind306aa, >3RK9_1|Chain... at 97%
3rkbRCSB PDB    PDBbind306aa, >3RKB_1|Chain... at 97%
3rmfRCSB PDB    PDBbind306aa, >3RMF_1|Chain... at 97%
3rniRCSB PDB    PDBbind306aa, >3RNI_1|Chain... at 97%
3rprRCSB PDB    PDBbind306aa, >3RPR_1|Chain... at 97%
3rpvRCSB PDB    PDBbind306aa, >3RPV_1|Chain... at 97%
3rzbRCSB PDB    PDBbind306aa, >3RZB_1|Chain... at 97%
3s00RCSB PDB    PDBbind306aa, >3S00_1|Chain... at 97%
3s0oRCSB PDB    PDBbind306aa, >3S0O_1|Chain... at 97%
3s1hRCSB PDB    PDBbind306aa, >3S1H_1|Chain... at 97%
3s2pRCSB PDB    PDBbind298aa, >3S2P_1|Chain... at 100%
3sqqRCSB PDB    PDBbind306aa, >3SQQ_1|Chain... at 97%
3ti1RCSB PDB    PDBbind298aa, >3TI1_1|Chain... at 100%
3tiyRCSB PDB    PDBbind298aa, >3TIY_1|Chain... at 100%
3tizRCSB PDB    PDBbind298aa, >3TIZ_1|Chain... at 100%
3uliRCSB PDB    PDBbind298aa, >3ULI_1|Chain... at 100%
3unjRCSB PDB    PDBbind298aa, >3UNJ_1|Chain... at 100%
3unkRCSB PDB    PDBbind298aa, >3UNK_1|Chain... at 100%
3wblRCSB PDB    PDBbind298aa, >3WBL_1|Chain... at 100%
4acmRCSB PDB    PDBbind299aa, >4ACM_1|Chain... at 99%
4bghRCSB PDB    PDBbind298aa, >4BGH_1|Chain... at 100%
4erwRCSB PDB    PDBbind306aa, >4ERW_1|Chain... at 97%
4ez3RCSB PDB    PDBbind306aa, >4EZ3_1|Chain... at 97%
4gcjRCSB PDB    PDBbind306aa, >4GCJ_1|Chain... at 97%
4lynRCSB PDB    PDBbind298aa, >4LYN_1|Chain... at 100%
4nj3RCSB PDB    PDBbind299aa, >4NJ3_1|Chain... at 99%
4rj3RCSB PDB    PDBbind298aa, >4RJ3_1|Chain... at 100%
5a14RCSB PDB    PDBbind299aa, >5A14_1|Chain... at 99%
5d1jRCSB PDB    PDBbind298aa, >5D1J_1|Chain... at 100%
5jq5RCSB PDB    PDBbind298aa, >5JQ5_1|Chain... at 100%
5jq8RCSB PDB    PDBbind298aa, >5JQ8_1|Chain... at 100%
5k4jRCSB PDB    PDBbind299aa, >5K4J_1|Chain... at 99%
5mhqRCSB PDB    PDBbind306aa, >5MHQ_1|Chain... at 97%
6guhRCSB PDB    PDBbind306aa, >6GUH_1|Chain... at 97%
6gukRCSB PDB    PDBbind306aa, >6GUK_1|Chain... at 97%
6q4gRCSB PDB    PDBbind306aa, >6Q4G_1|Chain... at 97%
6q4eRCSB PDB    PDBbind306aa, >6Q4E_1|Chain... at 97%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID3rpy
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameCyclin-dependent kinase 2
Ligand Name27Z
EC.Number E.C.2.7.11.22
Resolution 1.9(Å)
Affinity (Kd/Ki/IC50)IC50=4.8uM
Release Year2012
Protein/NA SequenceCheck fasta file
Primary Reference (2013) J.Med.Chem. Vol. 56: pp. 3768-3782
Ligand Properties
Formula C10H11N5O3S2
Molecular Weight 313.356
Exact Mass 313.030
No. of atoms 31
No. of bonds 32
Polar Surface Area 190.81
LOGP Value 0.81      (Computed with XLOGP3)
3.35      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P24941  
Entrez Gene IDNCBI Entrez Gene ID: 1017  
ASDInformation of known allosteric effects of PDB entries
 
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