Browse entries in the PDBbind-CN Database

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Related entries of code: 3s0d
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3s0bRCSB PDB    PDBbind119aa, >3S0B_1|Chain... *
3s0eRCSB PDB    PDBbind119aa, >3S0E_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID3s0d
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameApis mellifera Odorant-Binding Proteins (OBP14)
Ligand NameCTV
EC.Number E.C.-.-.-.-
Resolution 1.24(Å)
Affinity (Kd/Ki/IC50)Kd=90nM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2012) Insect Biochem.Mol.Biol. Vol. 42: pp. 41-50
Ligand Properties
Formula C10H22N
Molecular Weight 156.288
Exact Mass 156.175
No. of atoms 33
No. of bonds 32
Polar Surface Area 27.64
LOGP Value 3.25      (Computed with XLOGP3)
2.00      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 0
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 1
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q1W640  
Entrez Gene IDNCBI Entrez Gene ID: 677673  
ASDInformation of known allosteric effects of PDB entries

 
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