Browse entries in the PDBbind-CN Database

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Related entries of code: 3sna
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2alvRCSB PDB    PDBbind306aa, >2ALV_1|Chain... at 98%
2gz7RCSB PDB    PDBbind306aa, >2GZ7_1|Chain... at 99%
2gz8RCSB PDB    PDBbind306aa, >2GZ8_1|Chain... at 99%
2hobRCSB PDB    PDBbind306aa, >2HOB_1|Chain... at 99%
2op9RCSB PDB    PDBbind302aa, >2OP9_1|Chains... at 99%
2qiqRCSB PDB    PDBbind301aa, >2QIQ_1|Chain... at 99%
2v6nRCSB PDB    PDBbind306aa, >2V6N_1|Chain... at 99%
2vj1RCSB PDB    PDBbind309aa, >2VJ1_1|Chains... *
2z94RCSB PDB    PDBbind306aa, >2Z94_1|Chain... at 99%
2z9gRCSB PDB    PDBbind306aa, >2Z9G_1|Chain... at 99%
2zu4RCSB PDB    PDBbind306aa, >2ZU4_1|Chain... at 99%
2zu5RCSB PDB    PDBbind306aa, >2ZU5_1|Chain... at 99%
3atwRCSB PDB    PDBbind306aa, >3ATW_1|Chains... at 98%
3avzRCSB PDB    PDBbind306aa, >3AVZ_1|Chain... at 98%
3aw0RCSB PDB    PDBbind306aa, >3AW0_1|Chain... at 98%
3d62RCSB PDB    PDBbind299aa, >3D62_1|Chain... at 100%
3sn8RCSB PDB    PDBbind306aa, >3SN8_1|Chain... at 99%
3snbRCSB PDB    PDBbind306aa, >3SNB_1|Chain... at 99%
3sncRCSB PDB    PDBbind306aa, >3SNC_1|Chain... at 99%
3sndRCSB PDB    PDBbind306aa, >3SND_1|Chains... at 99%
3v3mRCSB PDB    PDBbind306aa, >3V3M_1|Chain... at 99%
3vb4RCSB PDB    PDBbind306aa, >3VB4_1|Chains... at 99%
3vb5RCSB PDB    PDBbind306aa, >3VB5_1|Chains... at 99%
3vb6RCSB PDB    PDBbind306aa, >3VB6_1|Chains... at 99%
3vb7RCSB PDB    PDBbind306aa, >3VB7_1|Chains... at 99%
4mdsRCSB PDB    PDBbind303aa, >4MDS_1|Chain... at 99%
4twwRCSB PDB    PDBbind306aa, >4TWW_1|Chains... at 98%
4twyRCSB PDB    PDBbind306aa, >4TWY_1|Chain... at 98%
4wy3RCSB PDB    PDBbind306aa, >4WY3_1|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1a7cRCSB PDB    PDBbind6-mer
1elrRCSB PDB    PDBbind6-mer
1guiRCSB PDB    PDBbind6-mer
1gvxRCSB PDB    PDBbind6-mer
1gwmRCSB PDB    PDBbind6-mer
1k9rRCSB PDB    PDBbind6-mer
1lybRCSB PDB    PDBbind6-mer
1njtRCSB PDB    PDBbind6-mer
1okvRCSB PDB    PDBbind6-mer
1ol1RCSB PDB    PDBbind6-mer
1ol2RCSB PDB    PDBbind6-mer
1q4kRCSB PDB    PDBbind6-mer
1rhkRCSB PDB    PDBbind6-mer
1sldRCSB PDB    PDBbind6-mer
1smeRCSB PDB    PDBbind6-mer
1strRCSB PDB    PDBbind6-mer
1urcRCSB PDB    PDBbind6-mer
1xt3RCSB PDB    PDBbind6-mer
1ym2RCSB PDB    PDBbind6-mer
1zfpRCSB PDB    PDBbind6-mer
2h65RCSB PDB    PDBbind6-mer
2h6tRCSB PDB    PDBbind6-mer
2hobRCSB PDB    PDBbind6-mer
2itkRCSB PDB    PDBbind6-mer
2l65RCSB PDB    PDBbind6-mer
2oqsRCSB PDB    PDBbind6-mer
2q6fRCSB PDB    PDBbind6-mer
2qzxRCSB PDB    PDBbind6-mer
2r0zRCSB PDB    PDBbind6-mer
2w76RCSB PDB    PDBbind6-mer
2x6xRCSB PDB    PDBbind6-mer
3avzRCSB PDB    PDBbind6-mer
3aw0RCSB PDB    PDBbind6-mer
3bv9RCSB PDB    PDBbind6-mer
3driRCSB PDB    PDBbind6-mer
3eysRCSB PDB    PDBbind6-mer
3fv3RCSB PDB    PDBbind6-mer
3fwvRCSB PDB    PDBbind6-mer
3h6zRCSB PDB    PDBbind6-mer
3hikRCSB PDB    PDBbind6-mer
3iquRCSB PDB    PDBbind6-mer
3iqvRCSB PDB    PDBbind6-mer
3kd7RCSB PDB    PDBbind6-mer
3luoRCSB PDB    PDBbind6-mer
3nthRCSB PDB    PDBbind6-mer
3oldRCSB PDB    PDBbind6-mer
3pslRCSB PDB    PDBbind6-mer
3q4jRCSB PDB    PDBbind6-mer
3q4kRCSB PDB    PDBbind6-mer
3q4lRCSB PDB    PDBbind6-mer
3r5jRCSB PDB    PDBbind6-mer
3r6gRCSB PDB    PDBbind6-mer
3rjmRCSB PDB    PDBbind6-mer
3sm1RCSB PDB    PDBbind6-mer
3snbRCSB PDB    PDBbind6-mer
3sncRCSB PDB    PDBbind6-mer
3sndRCSB PDB    PDBbind6-mer
3u51RCSB PDB    PDBbind6-mer
3ux0RCSB PDB    PDBbind6-mer
3wqwRCSB PDB    PDBbind6-mer
3zmtRCSB PDB    PDBbind6-mer
3zmuRCSB PDB    PDBbind6-mer
3zmvRCSB PDB    PDBbind6-mer
3zmzRCSB PDB    PDBbind6-mer
3zn0RCSB PDB    PDBbind6-mer
3zn1RCSB PDB    PDBbind6-mer
4a0jRCSB PDB    PDBbind6-mer
4apoRCSB PDB    PDBbind6-mer
4b3bRCSB PDB    PDBbind6-mer
4b4qRCSB PDB    PDBbind6-mer
4b8yRCSB PDB    PDBbind6-mer
4c4nRCSB PDB    PDBbind6-mer
4dgbRCSB PDB    PDBbind6-mer
4er2RCSB PDB    PDBbind6-mer
4exhRCSB PDB    PDBbind6-mer
4fr3RCSB PDB    PDBbind6-mer
4fysRCSB PDB    PDBbind6-mer
4fz3RCSB PDB    PDBbind6-mer
4gyeRCSB PDB    PDBbind6-mer
4gzfRCSB PDB    PDBbind6-mer
4ifiRCSB PDB    PDBbind6-mer
4iknRCSB PDB    PDBbind6-mer
4j09RCSB PDB    PDBbind6-mer
4j77RCSB PDB    PDBbind6-mer
4j79RCSB PDB    PDBbind6-mer
4j86RCSB PDB    PDBbind6-mer
4j8bRCSB PDB    PDBbind6-mer
4jj7RCSB PDB    PDBbind6-mer
4jj8RCSB PDB    PDBbind6-mer
4jjeRCSB PDB    PDBbind6-mer
4jr0RCSB PDB    PDBbind6-mer
4k3oRCSB PDB    PDBbind6-mer
4k3pRCSB PDB    PDBbind6-mer
4k3qRCSB PDB    PDBbind6-mer
4k3rRCSB PDB    PDBbind6-mer
4ny3RCSB PDB    PDBbind6-mer
4o9wRCSB PDB    PDBbind6-mer
4ou3RCSB PDB    PDBbind6-mer
4tszRCSB PDB    PDBbind6-mer
4tt2RCSB PDB    PDBbind6-mer
4wk2RCSB PDB    PDBbind6-mer
4wvtRCSB PDB    PDBbind6-mer
4x9rRCSB PDB    PDBbind6-mer
4x9vRCSB PDB    PDBbind6-mer
4ynlRCSB PDB    PDBbind6-mer
5a2iRCSB PDB    PDBbind6-mer
5a2jRCSB PDB    PDBbind6-mer
5a2kRCSB PDB    PDBbind6-mer
5e1bRCSB PDB    PDBbind6-mer
5e1dRCSB PDB    PDBbind6-mer
5e1mRCSB PDB    PDBbind6-mer
5e1oRCSB PDB    PDBbind6-mer
5epkRCSB PDB    PDBbind6-mer
5eplRCSB PDB    PDBbind6-mer
5eq0RCSB PDB    PDBbind6-mer
5fotRCSB PDB    PDBbind6-mer
5fouRCSB PDB    PDBbind6-mer
5fovRCSB PDB    PDBbind6-mer
5fowRCSB PDB    PDBbind6-mer
5foxRCSB PDB    PDBbind6-mer
5fpkRCSB PDB    PDBbind6-mer
5gwzRCSB PDB    PDBbind6-mer
5hvpRCSB PDB    PDBbind6-mer
5izfRCSB PDB    PDBbind6-mer
5l7kRCSB PDB    PDBbind6-mer
5lrgRCSB PDB    PDBbind6-mer
5lrjRCSB PDB    PDBbind6-mer
5lrkRCSB PDB    PDBbind6-mer
5lsoRCSB PDB    PDBbind6-mer
5tpcRCSB PDB    PDBbind6-mer
5w94RCSB PDB    PDBbind6-mer
5y24RCSB PDB    PDBbind6-mer
6aprRCSB PDB    PDBbind6-mer
6aszRCSB PDB    PDBbind6-mer
6at0RCSB PDB    PDBbind6-mer
6cdgRCSB PDB    PDBbind6-mer
6cgtRCSB PDB    PDBbind6-mer
6do4RCSB PDB    PDBbind6-mer
6do5RCSB PDB    PDBbind6-mer
6dubRCSB PDB    PDBbind6-mer
6eqxRCSB PDB    PDBbind6-mer
7hvpRCSB PDB    PDBbind6-mer
6rheRCSB PDB    PDBbind6-mer
6nsxRCSB PDB    PDBbind6-mer
6nsvRCSB PDB    PDBbind6-mer
6jijRCSB PDB    PDBbind6-mer
6im4RCSB PDB    PDBbind6-mer
6hzdRCSB PDB    PDBbind6-mer
6hzcRCSB PDB    PDBbind6-mer
6hp5RCSB PDB    PDBbind6-mer
6hmyRCSB PDB    PDBbind6-mer
6hleRCSB PDB    PDBbind6-mer
6fvoRCSB PDB    PDBbind6-mer
6fvnRCSB PDB    PDBbind6-mer
6fvmRCSB PDB    PDBbind6-mer
6fvlRCSB PDB    PDBbind6-mer
6efkRCSB PDB    PDBbind6-mer
6a30RCSB PDB    PDBbind6-mer
5zw6RCSB PDB    PDBbind6-mer
5zvwRCSB PDB    PDBbind6-mer
Entry Information
PDB ID3sna
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameSARS coronavirus main 3C-like proteinase
Ligand Name6-mer
EC.Number E.C.2.1.1.-
Resolution 3.05(Å)
Affinity (Kd/Ki/IC50)Ki=72.73uM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2011) Antiviral Res. Vol. 92: pp. 204-212
Ligand Properties
Formula C26H39N7O10
Molecular Weight 609.629
Exact Mass 609.276
No. of atoms 82
No. of bonds 82
Polar Surface Area 292.37
LOGP Value -4.92      (Computed with XLOGP3)
-1.85      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 10
No. of Hydrogen Bond Acceptors: 10
No. of Rotatable Bonds: 27
No. of Nitrogen and Oxygen Atoms: 17
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0C6U8  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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