Browse entries in the PDBbind-CN Database

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Related entries of code: 3t2v
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3ng4RCSB PDB    PDBbind171aa, >3NG4_1|Chains... *
3nw3RCSB PDB    PDBbind171aa, >3NW3_1|Chains... at 100%
3o4kRCSB PDB    PDBbind171aa, >3O4K_1|Chains... at 100%
3ogxRCSB PDB    PDBbind171aa, >3OGX_1|Chains... at 100%
3rt4RCSB PDB    PDBbind171aa, >3RT4_1|Chains... at 100%
3uilRCSB PDB    PDBbind171aa, >3UIL_1|Chains... at 100%
3umqRCSB PDB    PDBbind171aa, >3UMQ_1|Chains... at 100%
3usxRCSB PDB    PDBbind171aa, >3USX_1|Chains... at 100%
4fnnRCSB PDB    PDBbind171aa, >4FNN_1|Chains... at 100%
5e0aRCSB PDB    PDBbind171aa, >5E0A_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID3t2v
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NamePeptidoglycan recognition protein 1
Ligand NameKKJ
EC.Number E.C.-.-.-.-
Resolution 2.51(Å)
Affinity (Kd/Ki/IC50)Kd=0.103uM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2013) Arch.Biochem.Biophys. Vol. 529: pp. 1-10
Ligand Properties
Formula C15H30O3
Molecular Weight 258.397
Exact Mass 258.219
No. of atoms 48
No. of bonds 47
Polar Surface Area 57.53
LOGP Value 6.28      (Computed with XLOGP3)
3.99      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 12
No. of Nitrogen and Oxygen Atoms: 3
No. of Rings: 0
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9GK12  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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