Browse entries in the PDBbind-CN Database

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Related entries of code: 3ttz
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3u2kRCSB PDB    PDBbind198aa, >3U2K_1|Chains... at 99%
5d6pRCSB PDB    PDBbind212aa, >5D6P_1|Chains... *
5d6qRCSB PDB    PDBbind212aa, >5D6Q_1|Chains... at 100%
5d7cRCSB PDB    PDBbind212aa, >5D7C_1|Chains... at 100%
5d7rRCSB PDB    PDBbind212aa, >5D7R_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID3ttz
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameDNA gyrase subunit B
Ligand Name07N
EC.Number E.C.5.99.1.3
Resolution 1.63(Å)
Affinity (Kd/Ki/IC50)IC50=4nM
Release Year2011
Protein/NA SequenceCheck fasta file
Primary Reference (2011) Bioorg.Med.Chem.Lett. Vol. 21: pp. 7416-7420
Ligand Properties
Formula C15H15Cl2FN4O3S
Molecular Weight 421.274
Exact Mass 420.023
No. of atoms 41
No. of bonds 43
Polar Surface Area 126.56
LOGP Value 4.42      (Computed with XLOGP3)
3.59      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 4
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P0A0K8  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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