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Related entries of code: 3wjw
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1km3RCSB PDB    PDBbind247aa, >1KM3_1|Chain... at 99%
1lolRCSB PDB    PDBbind229aa, >1LOL_1|Chains... at 99%
1loqRCSB PDB    PDBbind228aa, >1LOQ_1|Chain... at 98%
1lorRCSB PDB    PDBbind228aa, >1LOR_1|Chain... at 98%
1losRCSB PDB    PDBbind224aa, >1LOS_1|Chains... at 98%
1x1zRCSB PDB    PDBbind252aa, >1X1Z_1|Chains... *
2zz1RCSB PDB    PDBbind252aa, >2ZZ1_1|Chains... at 100%
2zz2RCSB PDB    PDBbind252aa, >2ZZ2_1|Chains... at 99%
2zz6RCSB PDB    PDBbind252aa, >2ZZ6_1|Chains... at 100%
3g1dRCSB PDB    PDBbind228aa, >3G1D_1|Chains... at 99%
3g1vRCSB PDB    PDBbind228aa, >3G1V_1|Chains... at 98%
3w07RCSB PDB    PDBbind252aa, >3W07_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID3wjw
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameOrotidine 5'-phosphate decarboxylase
Ligand NameU6M
EC.Number E.C.4.1.1.23
Resolution 1.59(Å)
Affinity (Kd/Ki/IC50)Ki=134uM
Release Year2013
Protein/NA SequenceCheck fasta file
Primary Reference (2013) J.Am.Chem.Soc. Vol. 135: pp. 17432-17443
Ligand Properties
Formula C10H16N2O9P
Molecular Weight 339.216
Exact Mass 339.059
No. of atoms 38
No. of bonds 39
Polar Surface Area 188.06
LOGP Value -3.74      (Computed with XLOGP3)
-2.86      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 7
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 11
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): O26232  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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