Browse entries in the PDBbind-CN Database

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Related entries of code: 3zdh
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1uv6RCSB PDB    PDBbind210aa, >1UV6_1|Chains... at 100%
1uw6RCSB PDB    PDBbind211aa, >1UW6_1|Chains... at 99%
2zjuRCSB PDB    PDBbind214aa, >2ZJU_1|Chains... at 97%
2zjvRCSB PDB    PDBbind214aa, >2ZJV_1|Chains... at 97%
3u8jRCSB PDB    PDBbind210aa, >3U8J_1|Chains... at 100%
3u8kRCSB PDB    PDBbind210aa, >3U8K_1|Chains... at 100%
3u8lRCSB PDB    PDBbind210aa, >3U8L_1|Chains... at 100%
3u8mRCSB PDB    PDBbind210aa, >3U8M_1|Chains... at 100%
3u8nRCSB PDB    PDBbind210aa, >3U8N_1|Chains... at 100%
3wthRCSB PDB    PDBbind214aa, >3WTH_1|Chains... at 96%
3wtiRCSB PDB    PDBbind214aa, >3WTI_1|Chains... at 96%
3wtjRCSB PDB    PDBbind214aa, >3WTJ_1|Chains... at 97%
3wtkRCSB PDB    PDBbind214aa, >3WTK_1|Chains... at 96%
3wtlRCSB PDB    PDBbind214aa, >3WTL_1|Chains... at 97%
3wtmRCSB PDB    PDBbind214aa, >3WTM_1|Chains... at 96%
3wtnRCSB PDB    PDBbind214aa, >3WTN_1|Chains... at 97%
3wtoRCSB PDB    PDBbind214aa, >3WTO_1|Chains... at 96%
3zdgRCSB PDB    PDBbind210aa, >3ZDG_1|Chains... at 100%
4alxRCSB PDB    PDBbind229aa, >4ALX_1|Chains... *
4nzbRCSB PDB    PDBbind210aa, >4NZB_1|Chains... at 100%
4qaaRCSB PDB    PDBbind217aa, >4QAA_1|Chains... at 96%
4qabRCSB PDB    PDBbind217aa, >4QAB_1|Chains... at 96%
4qacRCSB PDB    PDBbind217aa, >4QAC_1|Chains... at 96%
4um1RCSB PDB    PDBbind229aa, >4UM1_1|Chains... at 98%
4um3RCSB PDB    PDBbind229aa, >4UM3_3|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID3zdh
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameACETYLCHOLINE BINDING PROTEIN
Ligand NameXRS
EC.Number E.C.-.-.-.-
Resolution 2.2(Å)
Affinity (Kd/Ki/IC50)Ki=45nM
Release Year2013
Protein/NA SequenceCheck fasta file
Primary Reference (2013) J.Med.Chem. Vol. 56: pp. 940
Ligand Properties
Formula C10H20N3O
Molecular Weight 198.285
Exact Mass 198.161
No. of atoms 34
No. of bonds 34
Polar Surface Area 31.49
LOGP Value 1.15      (Computed with XLOGP3)
-0.28      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 4
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P58154  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries
 
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