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Related entries of code: 4cc6
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4cc5RCSB PDB    PDBbind318aa, >4CC5_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!

Entry Information
PDB ID4cc6
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameBacterial DNA Ligase
Ligand NameL5Y
EC.Number E.C.6.5.1.2
Resolution 2.01(Å)
Affinity (Kd/Ki/IC50)IC50=0.23uM
Release Year2014
Protein/NA SequenceCheck fasta file
Primary Reference (2013) Acs Med.Chem.Lett. Vol. 4: pp. 1208-1212
Ligand Properties
Formula C14H12F3N5O
Molecular Weight 323.273
Exact Mass 323.099
No. of atoms 35
No. of bonds 37
Polar Surface Area 86.72
LOGP Value 1.33      (Computed with XLOGP3)
2.52      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 5
No. of Nitrogen and Oxygen Atoms: 6
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9AIU7  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
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