Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 4cmo
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2xb7RCSB PDB    PDBbind315aa, >2XB7_1|Chain... at 99%
2xbaRCSB PDB    PDBbind315aa, >2XBA_1|Chain... at 99%
2xp2RCSB PDB    PDBbind327aa, >2XP2_1|Chain... at 96%
2yfxRCSB PDB    PDBbind327aa, >2YFX_1|Chain... at 96%
3aoxRCSB PDB    PDBbind344aa, >3AOX_1|Chain... at 99%
4anqRCSB PDB    PDBbind342aa, >4ANQ_1|Chain... at 92%
4cd0RCSB PDB    PDBbind342aa, >4CD0_1|Chain... at 92%
4cliRCSB PDB    PDBbind327aa, >4CLI_1|Chain... at 96%
4cljRCSB PDB    PDBbind327aa, >4CLJ_1|Chain... at 96%
4cmtRCSB PDB    PDBbind327aa, >4CMT_1|Chain... at 96%
4cmuRCSB PDB    PDBbind327aa, >4CMU_1|Chain... at 96%
4cnhRCSB PDB    PDBbind327aa, >4CNH_1|Chains... at 96%
4dceRCSB PDB    PDBbind333aa, >4DCE_1|Chains... at 100%
4fnyRCSB PDB    PDBbind327aa, >4FNY_1|Chain... at 99%
4fnzRCSB PDB    PDBbind327aa, >4FNZ_1|Chain... at 100%
4fobRCSB PDB    PDBbind353aa, >4FOB_1|Chain... *
4focRCSB PDB    PDBbind353aa, >4FOC_1|Chain... at 100%
4fodRCSB PDB    PDBbind333aa, >4FOD_1|Chain... at 100%
4joaRCSB PDB    PDBbind344aa, >4JOA_1|Chain... at 98%
5a9uRCSB PDB    PDBbind327aa, >5A9U_1|Chain... at 96%
5aa8RCSB PDB    PDBbind327aa, >5AA8_1|Chain... at 96%
5aa9RCSB PDB    PDBbind327aa, >5AA9_1|Chain... at 96%
5aaaRCSB PDB    PDBbind327aa, >5AAA_1|Chain... at 96%
5aabRCSB PDB    PDBbind327aa, >5AAB_1|Chain... at 96%
5aacRCSB PDB    PDBbind327aa, >5AAC_1|Chain... at 96%
5ftoRCSB PDB    PDBbind315aa, >5FTO_1|Chain... at 99%
5ftqRCSB PDB    PDBbind315aa, >5FTQ_1|Chain... at 99%
5iugRCSB PDB    PDBbind327aa, >5IUG_1|Chain... at 100%
5iuhRCSB PDB    PDBbind327aa, >5IUH_1|Chain... at 100%
5iuiRCSB PDB    PDBbind327aa, >5IUI_1|Chain... at 100%
5kz0RCSB PDB    PDBbind327aa, >5KZ0_1|Chain... at 96%
6mx8RCSB PDB    PDBbind307aa, >6MX8_1|Chain... at 99%
6edlRCSB PDB    PDBbind322aa, >6EDL_1|Chain... at 98%
6ebwRCSB PDB    PDBbind322aa, >6EBW_1|Chain... at 98%
6e0rRCSB PDB    PDBbind322aa, >6E0R_1|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID4cmo
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameHuman Anaplastic Lymphoma Kinase
Ligand NameYPW
EC.Number E.C.2.7.10.1
Resolution 1.83(Å)
Affinity (Kd/Ki/IC50)Ki=0.85nM
Release Year2014
Protein/NA SequenceCheck fasta file
Primary Reference (2014) J.Med.Chem. Vol. 57: pp. 4720-4744
Ligand Properties
Formula C20H20FN5O3
Molecular Weight 397.403
Exact Mass 397.155
No. of atoms 49
No. of bonds 51
Polar Surface Area 112.25
LOGP Value 1.91      (Computed with XLOGP3)
3.74      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 2
No. of Hydrogen Bond Acceptors: 4
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9UM73  
Entrez Gene IDNCBI Entrez Gene ID: 238  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2025    上海盈赛思信息科技有限公司    网站备案号：沪ICP备2021015625号-3    沪公网安备：正在申请中


Technical Support（技术支持）: yingsaisi@foxmail.com