Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 4d2r
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2oj9RCSB PDB    PDBbind307aa, >2OJ9_1|Chain... at 99%
2zm3RCSB PDB    PDBbind308aa, >2ZM3_1|Chains... at 99%
3d94RCSB PDB    PDBbind301aa, >3D94_1|Chain... at 99%
3f5pRCSB PDB    PDBbind308aa, >3F5P_1|Chains... at 99%
3i81RCSB PDB    PDBbind315aa, >3I81_1|Chain... at 96%
3lvpRCSB PDB    PDBbind336aa, >3LVP_1|Chains... *
3lw0RCSB PDB    PDBbind304aa, >3LW0_1|Chains... at 99%
3nw5RCSB PDB    PDBbind307aa, >3NW5_1|Chain... at 99%
3nw6RCSB PDB    PDBbind307aa, >3NW6_1|Chain... at 99%
3nw7RCSB PDB    PDBbind307aa, >3NW7_1|Chain... at 99%
3o23RCSB PDB    PDBbind305aa, >3O23_1|Chain... at 99%
3qquRCSB PDB    PDBbind301aa, >3QQU_1|Chains... at 99%
5fxqRCSB PDB    PDBbind308aa, >5FXQ_1|Chain... at 99%
5fxrRCSB PDB    PDBbind308aa, >5FXR_1|Chain... at 99%
5fxsRCSB PDB    PDBbind308aa, >5FXS_1|Chain... at 99%
5hznRCSB PDB    PDBbind304aa, >5HZN_1|Chains... at 99%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4d2sRCSB PDB    PDBbindDYK
Entry Information
PDB ID4d2r
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namehuman Insulin-like growth factor 1 receptor, IGF1R
Ligand NameDYK
EC.Number E.C.2.7.10.1
Resolution 2.1(Å)
Affinity (Kd/Ki/IC50)IC50=3.3uM
Release Year2015
Protein/NA SequenceCheck fasta file
Primary Reference (2015) J.Med.Chem. Vol. 58: pp. 2834-2844
Ligand Properties
Formula C24H27N6O2
Molecular Weight 431.510
Exact Mass 431.220
No. of atoms 59
No. of bonds 63
Polar Surface Area 89.39
LOGP Value 3.33      (Computed with XLOGP3)
4.47      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P08069  
Entrez Gene IDNCBI Entrez Gene ID: 3480  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com