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Related entries of code: 4gk7
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
3gpjRCSB PDB    PDBbind198aa, >3GPJ_10|Chains... *
3mg0RCSB PDB    PDBbind198aa, >3MG0_10|Chains... at 100%
3mg4RCSB PDB    PDBbind198aa, >3MG4_10|Chains... at 100%
3mg6RCSB PDB    PDBbind198aa, >3MG6_10|Chains... at 100%
3mg7RCSB PDB    PDBbind198aa, >3MG7_10|Chains... at 100%
3mg8RCSB PDB    PDBbind198aa, >3MG8_10|Chains... at 100%
3nzwRCSB PDB    PDBbind198aa, >3NZW_10|Chains... at 100%
3nzxRCSB PDB    PDBbind198aa, >3NZX_10|Chains... at 100%
3oeuRCSB PDB    PDBbind198aa, >3OEU_10|Chains... at 100%
3oevRCSB PDB    PDBbind198aa, >3OEV_10|Chains... at 100%
3sdiRCSB PDB    PDBbind198aa, >3SDI_10|Chains... at 100%
3sdkRCSB PDB    PDBbind198aa, >3SDK_10|Chains... at 100%
3shjRCSB PDB    PDBbind198aa, >3SHJ_10|Chains... at 100%
4fzcRCSB PDB    PDBbind198aa, >4FZC_10|Chains... at 100%
4fzgRCSB PDB    PDBbind198aa, >4FZG_10|Chains... at 100%
4g4sRCSB PDB    PDBbind198aa, >4G4S_11|Chain... at 100%
4hnpRCSB PDB    PDBbind198aa, >4HNP_10|Chains... at 100%
4hrcRCSB PDB    PDBbind198aa, >4HRC_10|Chains... at 100%
4hrdRCSB PDB    PDBbind198aa, >4HRD_10|Chains... at 100%
4inrRCSB PDB    PDBbind198aa, >4INR_10|Chains... at 100%
4intRCSB PDB    PDBbind198aa, >4INT_10|Chains... at 100%
4inuRCSB PDB    PDBbind198aa, >4INU_10|Chains... at 100%
4j70RCSB PDB    PDBbind198aa, >4J70_10|Chains... at 100%
4nnnRCSB PDB    PDBbind198aa, >4NNN_10|Chains... at 100%
4nnwRCSB PDB    PDBbind198aa, >4NNW_10|Chains... at 100%
4no1RCSB PDB    PDBbind198aa, >4NO1_10|Chains... at 100%
4no6RCSB PDB    PDBbind198aa, >4NO6_10|Chains... at 100%
4no8RCSB PDB    PDBbind198aa, >4NO8_10|Chains... at 100%
4no9RCSB PDB    PDBbind198aa, >4NO9_10|Chains... at 100%
4q1sRCSB PDB    PDBbind198aa, >4Q1S_10|Chains... at 100%
4qlqRCSB PDB    PDBbind198aa, >4QLQ_10|Chains... at 100%
4qlsRCSB PDB    PDBbind198aa, >4QLS_10|Chains... at 100%
4qltRCSB PDB    PDBbind198aa, >4QLT_10|Chains... at 100%
4qluRCSB PDB    PDBbind198aa, >4QLU_10|Chains... at 100%
4qlvRCSB PDB    PDBbind198aa, >4QLV_10|Chains... at 100%
4qvlRCSB PDB    PDBbind198aa, >4QVL_10|Chains... at 100%
4qvmRCSB PDB    PDBbind198aa, >4QVM_10|Chains... at 100%
4qvnRCSB PDB    PDBbind198aa, >4QVN_10|Chains... at 100%
4qvpRCSB PDB    PDBbind198aa, >4QVP_10|Chains... at 100%
4qvqRCSB PDB    PDBbind198aa, >4QVQ_10|Chains... at 100%
4qvvRCSB PDB    PDBbind198aa, >4QVV_10|Chains... at 100%
4qvwRCSB PDB    PDBbind198aa, >4QVW_10|Chains... at 100%
4qvyRCSB PDB    PDBbind198aa, >4QVY_10|Chains... at 100%
4qw0RCSB PDB    PDBbind198aa, >4QW0_10|Chains... at 100%
4qw1RCSB PDB    PDBbind198aa, >4QW1_10|Chains... at 100%
4qw3RCSB PDB    PDBbind198aa, >4QW3_10|Chains... at 100%
4qw4RCSB PDB    PDBbind198aa, >4QW4_10|Chains... at 100%
4qw5RCSB PDB    PDBbind198aa, >4QW5_10|Chains... at 100%
4qw6RCSB PDB    PDBbind198aa, >4QW6_10|Chains... at 100%
4qw7RCSB PDB    PDBbind198aa, >4QW7_10|Chains... at 100%
4qwfRCSB PDB    PDBbind198aa, >4QWF_10|Chains... at 100%
4qwgRCSB PDB    PDBbind198aa, >4QWG_10|Chains... at 100%
4qwiRCSB PDB    PDBbind198aa, >4QWI_10|Chains... at 100%
4qwjRCSB PDB    PDBbind198aa, >4QWJ_10|Chains... at 100%
4qwkRCSB PDB    PDBbind198aa, >4QWK_10|Chains... at 100%
4qwlRCSB PDB    PDBbind198aa, >4QWL_10|Chains... at 100%
4qwrRCSB PDB    PDBbind198aa, >4QWR_10|Chains... at 100%
4qwsRCSB PDB    PDBbind198aa, >4QWS_10|Chains... at 100%
4qwuRCSB PDB    PDBbind198aa, >4QWU_10|Chains... at 100%
4qwxRCSB PDB    PDBbind198aa, >4QWX_10|Chains... at 100%
4qxjRCSB PDB    PDBbind198aa, >4QXJ_10|Chains... at 100%
4qz0RCSB PDB    PDBbind198aa, >4QZ0_10|Chains... at 100%
4qz1RCSB PDB    PDBbind198aa, >4QZ1_10|Chains... at 100%
4qz2RCSB PDB    PDBbind198aa, >4QZ2_10|Chains... at 100%
4qz3RCSB PDB    PDBbind198aa, >4QZ3_10|Chains... at 100%
4qz4RCSB PDB    PDBbind198aa, >4QZ4_10|Chains... at 100%
4qz5RCSB PDB    PDBbind198aa, >4QZ5_10|Chains... at 100%
4qz6RCSB PDB    PDBbind198aa, >4QZ6_10|Chains... at 100%
4qz7RCSB PDB    PDBbind198aa, >4QZ7_10|Chains... at 100%
4qzwRCSB PDB    PDBbind198aa, >4QZW_10|Chains... at 100%
4qzxRCSB PDB    PDBbind198aa, >4QZX_10|Chains... at 100%
4r02RCSB PDB    PDBbind198aa, >4R02_10|Chains... at 100%
4r17RCSB PDB    PDBbind198aa, >4R17_10|Chains... at 100%
4r18RCSB PDB    PDBbind198aa, >4R18_10|Chains... at 100%
5ahjRCSB PDB    PDBbind198aa, >5AHJ_10|Chains... at 100%
6g7fRCSB PDB    PDBbind198aa, >6G7F_10|Chains... at 100%
6g8mRCSB PDB    PDBbind198aa, >6G8M_10|Chains... at 100%
6g8nRCSB PDB    PDBbind198aa, >6G8N_10|Chains... at 100%
6gopRCSB PDB    PDBbind198aa, >6GOP_10|Chains... at 100%
6hvwRCSB PDB    PDBbind198aa, >6HVW_10|Chains... at 100%
6hvvRCSB PDB    PDBbind198aa, >6HVV_10|Chains... at 100%
6hvuRCSB PDB    PDBbind198aa, >6HVU_10|Chains... at 100%
6hvtRCSB PDB    PDBbind198aa, >6HVT_10|Chains... at 100%
6hvrRCSB PDB    PDBbind198aa, >6HVR_10|Chains... at 100%
6hvaRCSB PDB    PDBbind198aa, >6HVA_10|Chains... at 100%
6hv7RCSB PDB    PDBbind198aa, >6HV7_10|Chains... at 100%
6hv5RCSB PDB    PDBbind198aa, >6HV5_10|Chains... at 100%
6hv4RCSB PDB    PDBbind198aa, >6HV4_10|Chains... at 100%
6huvRCSB PDB    PDBbind198aa, >6HUV_10|Chains... at 100%
6huuRCSB PDB    PDBbind198aa, >6HUU_10|Chains... at 100%
6huqRCSB PDB    PDBbind198aa, >6HUQ_10|Chains... at 100%
6hucRCSB PDB    PDBbind198aa, >6HUC_10|Chains... at 100%
6hubRCSB PDB    PDBbind198aa, >6HUB_10|Chains... at 100%
6htrRCSB PDB    PDBbind198aa, >6HTR_10|Chains... at 100%
6htpRCSB PDB    PDBbind198aa, >6HTP_10|Chains... at 100%
6htdRCSB PDB    PDBbind198aa, >6HTD_10|Chains... at 100%
6htcRCSB PDB    PDBbind198aa, >6HTC_10|Chains... at 100%
6hvsRCSB PDB    PDBbind198aa, >6HVS_10|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1a07RCSB PDB    PDBbind4-mer
1a08RCSB PDB    PDBbind4-mer
1a09RCSB PDB    PDBbind4-mer
1a1eRCSB PDB    PDBbind4-mer
1a2cRCSB PDB    PDBbind4-mer
1aq7RCSB PDB    PDBbind4-mer
1e5jRCSB PDB    PDBbind4-mer
1ez9RCSB PDB    PDBbind4-mer
1gvkRCSB PDB    PDBbind4-mer
1ibcRCSB PDB    PDBbind4-mer
1is0RCSB PDB    PDBbind4-mer
1jyqRCSB PDB    PDBbind4-mer
1lkkRCSB PDB    PDBbind4-mer
1lklRCSB PDB    PDBbind4-mer
1m21RCSB PDB    PDBbind4-mer
1n51RCSB PDB    PDBbind4-mer
1popRCSB PDB    PDBbind4-mer
1ppiRCSB PDB    PDBbind4-mer
1s3kRCSB PDB    PDBbind4-mer
1tl9RCSB PDB    PDBbind4-mer
1uktRCSB PDB    PDBbind4-mer
1y3pRCSB PDB    PDBbind4-mer
2i3hRCSB PDB    PDBbind4-mer
2n7bRCSB PDB    PDBbind4-mer
2psxRCSB PDB    PDBbind4-mer
2vslRCSB PDB    PDBbind4-mer
2x6wRCSB PDB    PDBbind4-mer
2x6yRCSB PDB    PDBbind4-mer
2x85RCSB PDB    PDBbind4-mer
2xe4RCSB PDB    PDBbind4-mer
3cheRCSB PDB    PDBbind4-mer
3d3xRCSB PDB    PDBbind4-mer
3jzgRCSB PDB    PDBbind4-mer
3k0kRCSB PDB    PDBbind4-mer
3k16RCSB PDB    PDBbind4-mer
3mp6RCSB PDB    PDBbind4-mer
3niiRCSB PDB    PDBbind4-mer
3nijRCSB PDB    PDBbind4-mer
3nikRCSB PDB    PDBbind4-mer
3nilRCSB PDB    PDBbind4-mer
3nimRCSB PDB    PDBbind4-mer
3ny3RCSB PDB    PDBbind4-mer
3qmkRCSB PDB    PDBbind4-mer
3t1nRCSB PDB    PDBbind4-mer
3t4pRCSB PDB    PDBbind4-mer
3u3zRCSB PDB    PDBbind4-mer
3uecRCSB PDB    PDBbind4-mer
3ut5RCSB PDB    PDBbind4-mer
3uw4RCSB PDB    PDBbind4-mer
3uw5RCSB PDB    PDBbind4-mer
3zybRCSB PDB    PDBbind4-mer
4b9hRCSB PDB    PDBbind4-mer
4c16RCSB PDB    PDBbind4-mer
4c1tRCSB PDB    PDBbind4-mer
4dxgRCSB PDB    PDBbind4-mer
4fgtRCSB PDB    PDBbind4-mer
4fzcRCSB PDB    PDBbind4-mer
4fzgRCSB PDB    PDBbind4-mer
4hp0RCSB PDB    PDBbind4-mer
4i67RCSB PDB    PDBbind4-mer
4imqRCSB PDB    PDBbind4-mer
4imzRCSB PDB    PDBbind4-mer
4in9RCSB PDB    PDBbind4-mer
4inhRCSB PDB    PDBbind4-mer
4j44RCSB PDB    PDBbind4-mer
4j45RCSB PDB    PDBbind4-mer
4j46RCSB PDB    PDBbind4-mer
4j47RCSB PDB    PDBbind4-mer
4j48RCSB PDB    PDBbind4-mer
4k63RCSB PDB    PDBbind4-mer
4k66RCSB PDB    PDBbind4-mer
4komRCSB PDB    PDBbind4-mer
4kx8RCSB PDB    PDBbind4-mer
4lkdRCSB PDB    PDBbind4-mer
4lkeRCSB PDB    PDBbind4-mer
4lkfRCSB PDB    PDBbind4-mer
4mbpRCSB PDB    PDBbind4-mer
4q4iRCSB PDB    PDBbind4-mer
4trwRCSB PDB    PDBbind4-mer
4trzRCSB PDB    PDBbind4-mer
4x0zRCSB PDB    PDBbind4-mer
4x14RCSB PDB    PDBbind4-mer
4z7nRCSB PDB    PDBbind4-mer
4z7oRCSB PDB    PDBbind4-mer
5ab1RCSB PDB    PDBbind4-mer
5ajcRCSB PDB    PDBbind4-mer
5azfRCSB PDB    PDBbind4-mer
5btvRCSB PDB    PDBbind4-mer
5e6oRCSB PDB    PDBbind4-mer
5efjRCSB PDB    PDBbind4-mer
5f2uRCSB PDB    PDBbind4-mer
5f90RCSB PDB    PDBbind4-mer
5izjRCSB PDB    PDBbind4-mer
5jopRCSB PDB    PDBbind4-mer
5jy0RCSB PDB    PDBbind4-mer
5tdbRCSB PDB    PDBbind4-mer
5vi6RCSB PDB    PDBbind4-mer
5wxpRCSB PDB    PDBbind4-mer
5yzdRCSB PDB    PDBbind4-mer
5zmqRCSB PDB    PDBbind4-mer
5zmsRCSB PDB    PDBbind4-mer
6cctRCSB PDB    PDBbind4-mer
6ccuRCSB PDB    PDBbind4-mer
6cd8RCSB PDB    PDBbind4-mer
6cd9RCSB PDB    PDBbind4-mer
6cdcRCSB PDB    PDBbind4-mer
6m8wRCSB PDB    PDBbind4-mer
6m8yRCSB PDB    PDBbind4-mer
6m9fRCSB PDB    PDBbind4-mer
6msyRCSB PDB    PDBbind4-mer
6mu3RCSB PDB    PDBbind4-mer
6pu3RCSB PDB    PDBbind4-mer
6prgRCSB PDB    PDBbind4-mer
6n3fRCSB PDB    PDBbind4-mer
6jjnRCSB PDB    PDBbind4-mer
6jjmRCSB PDB    PDBbind4-mer
6hopRCSB PDB    PDBbind4-mer
Entry Information
PDB ID4gk7
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameProteasome
Ligand Name4-mer
EC.Number E.C.3.4.25.1
Resolution 2.8(Å)
Affinity (Kd/Ki/IC50)Ki=12.5nM
Release Year2012
Protein/NA SequenceCheck fasta file
Primary Reference (2012) Biochemistry Vol. 51: pp. 6880-6888
Ligand Properties
Formula C29H48N4O5
Molecular Weight 532.715
Exact Mass 532.362
No. of atoms 86
No. of bonds 86
Polar Surface Area 136.63
LOGP Value 5.07      (Computed with XLOGP3)
4.25      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 16
No. of Nitrogen and Oxygen Atoms: 9
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P21242  P21243  P22141  P23638  P23639  P23724  P25043  P25451  P30656  P30657  P32379  P38624  P40302  P40303  
Entrez Gene IDNCBI Entrez Gene ID: 854544  852873  856731  853036  854882  852239  854328  856830  856218  850611  853168  853456  855362  854119  
ASDInformation of known allosteric effects of PDB entries
 
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