Browse entries in the PDBbind-CN Database

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Related entries of code: 4im0
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
5w5vRCSB PDB    PDBbind660aa, >5W5V_1|Chain... at 98%
6bnyRCSB PDB    PDBbind660aa, >6BNY_1|Chain... at 98%
6bodRCSB PDB    PDBbind660aa, >6BOD_1|Chain... at 98%
6boeRCSB PDB    PDBbind660aa, >6BOE_1|Chain... at 98%
6cq0RCSB PDB    PDBbind660aa, >6CQ0_1|Chain... at 98%
6cq4RCSB PDB    PDBbind660aa, >6CQ4_1|Chain... at 98%
6cq5RCSB PDB    PDBbind660aa, >6CQ5_1|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
6qauRCSB PDB    PDBbind1FV
Entry Information
PDB ID4im0
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameSerine/threonine-protein kinase TBK1 (D135N mutation)
Ligand Name1FV
EC.Number E.C.2.7.11.1
Resolution 2.4(Å)
Affinity (Kd/Ki/IC50)IC50=19nM
Release Year2013
Protein/NA SequenceCheck fasta file
Primary Reference (2013) Cell Reports 3. pp.747-758
Ligand Properties
Formula C26H37N6O2
Molecular Weight 465.611
Exact Mass 465.298
No. of atoms 71
No. of bonds 75
Polar Surface Area 92.61
LOGP Value 3.99      (Computed with XLOGP3)
4.34      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 4
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 12
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 5
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q9UHD2  
Entrez Gene IDNCBI Entrez Gene ID: 29110  
ASDInformation of known allosteric effects of PDB entries
 
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