Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 4m13
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1sm2RCSB PDB    PDBbind264aa, >1SM2_1|Chains... at 98%
3miyRCSB PDB    PDBbind266aa, >3MIY_1|Chains... at 96%
3mj1RCSB PDB    PDBbind266aa, >3MJ1_1|Chain... at 96%
3mj2RCSB PDB    PDBbind266aa, >3MJ2_1|Chain... at 96%
3qgwRCSB PDB    PDBbind286aa, >3QGW_1|Chains... *
3qgyRCSB PDB    PDBbind286aa, >3QGY_1|Chains... at 100%
3t9tRCSB PDB    PDBbind267aa, >3T9T_1|Chain... at 97%
3v5jRCSB PDB    PDBbind266aa, >3V5J_1|Chains... at 98%
3v5lRCSB PDB    PDBbind266aa, >3V5L_1|Chains... at 98%
3v8tRCSB PDB    PDBbind266aa, >3V8T_1|Chains... at 98%
3v8wRCSB PDB    PDBbind266aa, >3V8W_1|Chains... at 98%
4hctRCSB PDB    PDBbind269aa, >4HCT_1|Chain... at 97%
4hcuRCSB PDB    PDBbind269aa, >4HCU_1|Chain... at 97%
4hcvRCSB PDB    PDBbind269aa, >4HCV_1|Chain... at 97%
4kioRCSB PDB    PDBbind266aa, >4KIO_1|Chains... at 97%
4m0yRCSB PDB    PDBbind269aa, >4M0Y_1|Chain... at 97%
4m0zRCSB PDB    PDBbind269aa, >4M0Z_1|Chain... at 97%
4m12RCSB PDB    PDBbind269aa, >4M12_1|Chain... at 97%
4m14RCSB PDB    PDBbind269aa, >4M14_1|Chain... at 97%
4mf0RCSB PDB    PDBbind266aa, >4MF0_1|Chains... at 97%
4mf1RCSB PDB    PDBbind266aa, >4MF1_1|Chains... at 96%
4pp9RCSB PDB    PDBbind266aa, >4PP9_1|Chains... at 97%
4ppaRCSB PDB    PDBbind266aa, >4PPA_1|Chains... at 97%
4ppbRCSB PDB    PDBbind266aa, >4PPB_1|Chains... at 97%
4ppcRCSB PDB    PDBbind266aa, >4PPC_1|Chains... at 97%
4pqnRCSB PDB    PDBbind266aa, >4PQN_1|Chain... at 96%
4qd6RCSB PDB    PDBbind266aa, >4QD6_1|Chains... at 97%
4rfmRCSB PDB    PDBbind266aa, >4RFM_1|Chain... at 96%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID4m13
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameTyrosine-protein kinase ITK/TSK kinase domain
Ligand Name1E0
EC.Number E.C.Homo sapiens
Resolution 1.85(Å)
Affinity (Kd/Ki/IC50)Kd=0.2uM
Release Year2014
Protein/NA SequenceCheck fasta file
Primary Reference (2014) Biochem.J. Vol. 460: pp. 211-222
Ligand Properties
Formula C18H19N5O3
Molecular Weight 353.375
Exact Mass 353.149
No. of atoms 45
No. of bonds 47
Polar Surface Area 125.26
LOGP Value 2.37      (Computed with XLOGP3)
3.88      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 3
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 7
No. of Nitrogen and Oxygen Atoms: 8
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q08881  
Entrez Gene IDNCBI Entrez Gene ID: 3702  
ASDInformation of known allosteric effects of PDB entries
 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝ｅ湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com