Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 4na4
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4b1jRCSB PDB    PDBbind531aa, >4B1J_1|Chain... at 99%
6oa3RCSB PDB    PDBbind533aa, >6OA3_1|Chain... at 100%
6oa1RCSB PDB    PDBbind533aa, >6OA1_1|Chain... at 100%
6o9xRCSB PDB    PDBbind533aa, >6O9X_1|Chain... *
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
4b1jRCSB PDB    PDBbindA1R
6hh3RCSB PDB    PDBbindA1R

Entry Information
PDB ID4na4
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namemouse poly(ADP-ribose) glycohydrolase (PARG) catalytic domain
Ligand NameA1R
EC.Number E.C.3.2.1.143
Resolution 2.5(Å)
Affinity (Kd/Ki/IC50)IC50=120nM
Release Year2014
Protein/NA SequenceCheck fasta file
Primary Reference (2014) Plos One Vol. 9: pp. e86010-e86010
Ligand Properties
Formula C15H27N6O12P2
Molecular Weight 545.355
Exact Mass 545.116
No. of atoms 62
No. of bonds 65
Polar Surface Area 312.17
LOGP Value -6.10      (Computed with XLOGP3)
-2.78      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 6
No. of Hydrogen Bond Acceptors: 11
No. of Rotatable Bonds: 13
No. of Nitrogen and Oxygen Atoms: 18
No. of Rings: 4
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): O88622  
Entrez Gene IDNo matched NCBI Entrez Gene ID found!
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com