Browse entries in the PDBbind-CN Database

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Related entries of code: 4ngt
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
2c6cRCSB PDB    PDBbind707aa, >2C6C_1|Chain... at 100%
2c6gRCSB PDB    PDBbind707aa, >2C6G_1|Chain... at 100%
2jbjRCSB PDB    PDBbind707aa, >2JBJ_1|Chain... at 100%
2jbkRCSB PDB    PDBbind707aa, >2JBK_1|Chain... at 100%
2or4RCSB PDB    PDBbind709aa, >2OR4_1|Chain... at 100%
2pvvRCSB PDB    PDBbind709aa, >2PVV_1|Chain... at 100%
2pvwRCSB PDB    PDBbind709aa, >2PVW_1|Chain... at 100%
2xefRCSB PDB    PDBbind709aa, >2XEF_1|Chain... at 99%
2xegRCSB PDB    PDBbind709aa, >2XEG_1|Chain... at 99%
2xeiRCSB PDB    PDBbind709aa, >2XEI_1|Chain... at 100%
2xejRCSB PDB    PDBbind709aa, >2XEJ_1|Chain... at 99%
3bhxRCSB PDB    PDBbind709aa, >3BHX_1|Chain... at 100%
3bi0RCSB PDB    PDBbind709aa, >3BI0_1|Chain... at 100%
3bi1RCSB PDB    PDBbind709aa, >3BI1_1|Chain... at 100%
3d7dRCSB PDB    PDBbind709aa, >3D7D_1|Chain... at 100%
3d7fRCSB PDB    PDBbind709aa, >3D7F_1|Chain... at 100%
3d7gRCSB PDB    PDBbind709aa, >3D7G_1|Chain... at 100%
3d7hRCSB PDB    PDBbind709aa, >3D7H_1|Chain... at 100%
3iwwRCSB PDB    PDBbind709aa, >3IWW_1|Chain... at 100%
3rbuRCSB PDB    PDBbind739aa, >3RBU_1|Chain... *
3sjfRCSB PDB    PDBbind709aa, >3SJF_1|Chain... at 100%
4lqgRCSB PDB    PDBbind709aa, >4LQG_1|Chain... at 100%
4ngmRCSB PDB    PDBbind739aa, >4NGM_1|Chain... at 100%
4ngnRCSB PDB    PDBbind739aa, >4NGN_1|Chain... at 100%
4ngpRCSB PDB    PDBbind739aa, >4NGP_1|Chain... at 100%
4ngqRCSB PDB    PDBbind739aa, >4NGQ_1|Chain... at 100%
4ngrRCSB PDB    PDBbind739aa, >4NGR_1|Chain... at 100%
4ngsRCSB PDB    PDBbind739aa, >4NGS_1|Chain... at 100%
4oc0RCSB PDB    PDBbind709aa, >4OC0_1|Chain... at 100%
4oc1RCSB PDB    PDBbind709aa, >4OC1_1|Chain... at 100%
4oc2RCSB PDB    PDBbind709aa, >4OC2_1|Chain... at 100%
4oc3RCSB PDB    PDBbind709aa, >4OC3_1|Chain... at 100%
4oc4RCSB PDB    PDBbind709aa, >4OC4_1|Chain... at 100%
4oc5RCSB PDB    PDBbind709aa, >4OC5_1|Chain... at 100%
4p44RCSB PDB    PDBbind707aa, >4P44_1|Chain... at 100%
4p45RCSB PDB    PDBbind707aa, >4P45_1|Chain... at 100%
4p4bRCSB PDB    PDBbind707aa, >4P4B_1|Chain... at 100%
4p4dRCSB PDB    PDBbind707aa, >4P4D_1|Chain... at 100%
4p4eRCSB PDB    PDBbind707aa, >4P4E_1|Chain... at 100%
4p4fRCSB PDB    PDBbind707aa, >4P4F_1|Chain... at 100%
4p4iRCSB PDB    PDBbind707aa, >4P4I_1|Chain... at 100%
4p4jRCSB PDB    PDBbind707aa, >4P4J_1|Chain... at 100%
4x3rRCSB PDB    PDBbind739aa, >4X3R_1|Chain... at 100%
5d29RCSB PDB    PDBbind695aa, >5D29_1|Chain... at 100%
5elyRCSB PDB    PDBbind696aa, >5ELY_1|Chain... at 100%
5of0RCSB PDB    PDBbind707aa, >5OF0_1|Chain... at 99%
6h7yRCSB PDB    PDBbind707aa, >6H7Y_1|Chain... at 100%
6h7zRCSB PDB    PDBbind707aa, >6H7Z_1|Chain... at 100%
6hkjRCSB PDB    PDBbind707aa, >6HKJ_1|Chain... at 100%
6hkzRCSB PDB    PDBbind707aa, >6HKZ_1|Chain... at 100%
6fe5RCSB PDB    PDBbind707aa, >6FE5_1|Chain... at 99%
6ez9RCSB PDB    PDBbind707aa, >6EZ9_1|Chain... at 99%
6etyRCSB PDB    PDBbind707aa, >6ETY_1|Chain... at 100%
6f5lRCSB PDB    PDBbind707aa, >6F5L_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
No complexes with the same small molecule ligand are found!
Entry Information
PDB ID4ngt
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameGlutamate carboxypeptidase II
Ligand NameJ42
EC.Number E.C.3.4.17.21
Resolution 2.31(Å)
Affinity (Kd/Ki/IC50)Ki=3.88nM
Release Year2014
Protein/NA SequenceCheck fasta file
Primary Reference (2014)Bioorg. Med. Chem.vol. 22 :pp.4099-4108
Ligand Properties
Formula C23H32BrN5O10
Molecular Weight 618.432
Exact Mass 617.133
No. of atoms 71
No. of bonds 71
Polar Surface Area 232.49
LOGP Value 3.44      (Computed with XLOGP3)
2.96      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 5
No. of Hydrogen Bond Acceptors: 9
No. of Rotatable Bonds: 19
No. of Nitrogen and Oxygen Atoms: 15
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): Q04609  
Entrez Gene IDNCBI Entrez Gene ID: 2346  
ASDInformation of known allosteric effects of PDB entries
 
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